RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 ABCB8Q9NUT2 735 aa20.67■□□□□ 0.9
CDHR3-210ENST00000474330 FBXO10Q9UK96 956 aa20.67■□□□□ 0.9
CDHR3-210ENST00000474330 TEX264Q9Y6I9 313 aa20.67■□□□□ 0.9
CDHR3-210ENST00000474330 MUSKO15146 869 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 HOXC11O43248 304 aaPredicted RBP20.66■□□□□ 0.9
CDHR3-210ENST00000474330 BANF1O75531 89 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 ADH1CP00326 375 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 ASGR2P07307 311 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 GEMIN4P57678 1058 aaKnown RBP20.66■□□□□ 0.9
CDHR3-210ENST00000474330 SPARCL1Q14515 664 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 SLC29A2Q14542 456 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 PDGFRLQ15198 375 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 DNAJC21Q5F1R6 531 aaKnown RBP20.66■□□□□ 0.9
CDHR3-210ENST00000474330 PITRM1Q5JRX3 1037 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 ASTLQ6HA08 431 aaPredicted RBP20.66■□□□□ 0.9
CDHR3-210ENST00000474330 NAPEPLDQ6IQ20 393 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 MTSS1LQ765P7 747 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 LINC00523Q86TU6 105 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 PLCD3Q8N3E9 789 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.66■□□□□ 0.9
CDHR3-210ENST00000474330 PYROXD1Q8WU10 500 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 ATP2A3Q93084 1043 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 ELSPBP1Q96BH3 223 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 TADA1Q96BN2 335 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 ZIM3Q96PE6 472 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 CASS4Q9NQ75 786 aa20.66■□□□□ 0.9
CDHR3-210ENST00000474330 MMP2P08253 660 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 NUDT17P0C025 328 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 ADH5P11766 374 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 DSC2Q02487 901 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 SLC20A2Q08357 652 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 MTM1Q13496 603 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 DMC1Q14565 340 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 TMEM31Q5JXX7 168 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 HP1BP3Q5SSJ5 553 aaPredicted RBP20.65■□□□□ 0.9
CDHR3-210ENST00000474330 DENND2CQ68D51 928 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 LINGO4Q6UY18 593 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 KIAA0907Q7Z7F0 614 aaPredicted RBP20.65■□□□□ 0.9
CDHR3-210ENST00000474330 AGGF1Q8N302 714 aaeCLIP20.65■□□□□ 0.9
CDHR3-210ENST00000474330 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.65■□□□□ 0.9
CDHR3-210ENST00000474330 ST13P5Q8NFI4 369 aaPredicted RBP20.65■□□□□ 0.9
CDHR3-210ENST00000474330 FGF14Q92915 247 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 SIGLEC10Q96LC7 697 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 WDR83Q9BRX9 315 aaKnown RBP20.65■□□□□ 0.9
CDHR3-210ENST00000474330 GGA2Q9UJY4 613 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 PLAAQ9Y263 795 aa20.65■□□□□ 0.9
CDHR3-210ENST00000474330 AP3B1O00203 1094 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 PABPC1P11940 636 aaKnown RBP20.64■□□□□ 0.9
CDHR3-210ENST00000474330 ELK3P41970 407 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 CCDC38Q502W7 563 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 UBAP2Q5T6F2 1119 aaKnown RBP20.64■□□□□ 0.9
CDHR3-210ENST00000474330 KDELC1Q6UW63 502 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 PARM1Q6UWI2 310 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 LRIG3Q6UXM1 1119 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 METTL3Q86U44 580 aaKnown RBP20.64■□□□□ 0.9
CDHR3-210ENST00000474330 ANKMY2Q8IV38 441 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 FBXO36Q8NEA4 188 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 ZFYVE19Q96K21 471 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 XPO6Q96QU8 1125 aaKnown RBP20.64■□□□□ 0.9
CDHR3-210ENST00000474330 SEMA3CQ99985 751 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 KXD1Q9BQD3 176 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 EBF3Q9H4W6 596 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 LRRC4CQ9HCJ2 640 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 NFS1Q9Y697 457 aa20.64■□□□□ 0.9
CDHR3-210ENST00000474330 MIA3Q5JRA6 1907 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 USP12O75317 370 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 ECI2O75521 394 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 TMCC1O94876 653 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 ACSL3O95573 720 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 ARSAP15289 507 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 TSHRP16473 764 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 CR2P20023 1033 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 CES1P23141 567 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 ADRA1AP35348 466 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 CD86P42081 329 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 SKOR1P84550 965 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 NSUN2Q08J23 767 aaKnown RBP eCLIP20.64■□□□□ 0.89
CDHR3-210ENST00000474330 OLIG2Q13516 323 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 SLC14A2Q15849 920 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 FUT11Q495W5 492 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 IPMKQ8NFU5 416 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 OR52K1Q8NGK4 314 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 MRGPRX2Q96LB1 330 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 PLA2G2FQ9BZM2 168 aa20.64■□□□□ 0.89
CDHR3-210ENST00000474330 SDR42E2A6NKP2 422 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 AGPSO00116 658 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 PMPCBO75439 489 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 ABHD2P08910 425 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 PSMC3P17980 439 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 SERPINH1P50454 418 aaKnown RBP20.63■□□□□ 0.89
CDHR3-210ENST00000474330 WNT3AP56704 352 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 IHHQ14623 411 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 RANBP10Q6VN20 620 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 MTERF4Q7Z6M4 381 aaKnown RBP20.63■□□□□ 0.89
CDHR3-210ENST00000474330 IGDCC3Q8IVU1 814 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 YAF2Q8IY57 180 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 NAT16Q8N8M0 369 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 TBL1YQ9BQ87 522 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 ECT2Q9H8V3 914 aa20.63■□□□□ 0.89
CDHR3-210ENST00000474330 KCNK12Q9HB15 430 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms