RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 OR2T34Q8NGX1 318 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 OR2T3Q8NH03 318 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 RDH11Q8TC12 318 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 STARD8Q92502 1023 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 CSPG4P5Q96PW8 444 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 GBA2Q9HCG7 927 aaPredicted RBP18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 FZD1Q9UP38 647 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 RNF103O00237 685 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 MATN1P21941 496 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 NFKBIAP25963 317 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 ATXN1P54253 815 aaKnown RBP18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 GRSF1Q12849 480 aaKnown RBP eCLIP18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 DEPDC1Q5TB30 811 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 IRAK1BP1Q5VVH5 260 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 LAYNQ6UX15 382 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 DCPSQ96C86 337 aaKnown RBP18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 C1orf50Q9BV19 199 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 C1QTNF1Q9BXJ1 281 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 MRPL4Q9BYD3 311 aaKnown RBP18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 VRTNQ9H8Y1 702 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 GGA3Q9NZ52 723 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 CCDC167Q9P0B6 97 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 TMEM181Q9P2C4 612 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 GIT1Q9Y2X7 761 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 TCAF1Q9Y4C2 921 aa18.83■□□□□ 0.61
ECHDC1-214ENST00000474289 FSTL1Q12841 308 aa18.83■□□□□ 0.6
ECHDC1-214ENST00000474289 PITRM1Q5JRX3 1037 aa18.83■□□□□ 0.6
ECHDC1-214ENST00000474289 SAMD4BQ5PRF9 694 aaKnown RBP18.83■□□□□ 0.6
ECHDC1-214ENST00000474289 ABRAXAS1Q6UWZ7 409 aa18.83■□□□□ 0.6
ECHDC1-214ENST00000474289 VPS39Q96JC1 886 aa18.83■□□□□ 0.6
ECHDC1-214ENST00000474289 OLFM1Q99784 485 aa18.83■□□□□ 0.6
ECHDC1-214ENST00000474289 SLC39A3Q9BRY0 314 aa18.83■□□□□ 0.6
ECHDC1-214ENST00000474289 MTG1Q9BT17 334 aaPredicted RBP18.83■□□□□ 0.6
ECHDC1-214ENST00000474289 ADAMTS10Q9H324 1103 aa18.83■□□□□ 0.6
ECHDC1-214ENST00000474289 SLC39A10Q9ULF5 831 aa18.83■□□□□ 0.6
ECHDC1-214ENST00000474289 AURKCQ9UQB9 309 aa18.83■□□□□ 0.6
ECHDC1-214ENST00000474289 ANK1P16157 1881 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 CCDC162PA2VCL2 907 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 CLOCKO15516 846 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 GNL1P36915 607 aaPredicted RBP18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 YAP1P46937 504 aaKnown RBP18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 PRKAA2P54646 552 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 OXA1LQ15070 435 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 SNX31Q8N9S9 440 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 ANKRD52Q8NB46 1076 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 OR52K1Q8NGK4 314 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 CXorf38Q8TB03 319 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 SEPT8Q92599 483 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 SCYL1Q96KG9 808 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 RNF103-CHMP3A0A140T963 221 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 ZCWPW2A0A1B0GU75 182 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 TIMM44O43615 452 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 CLPXO76031 633 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 BCL10O95999 233 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 VDRP11473 427 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 IREB2P48200 963 aaKnown RBP18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 SLC7A2P52569 658 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 ZBTB17Q13105 803 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 FASTKQ14296 549 aaKnown RBP18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 AGKQ53H12 422 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 TBCELQ5QJ74 424 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 MAP1SQ66K74 1059 aaPredicted RBP18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 XRRA1Q6P2D8 792 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 COLGALT2Q8IYK4 626 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 OR13F1Q8NGS4 319 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 KHSRPQ92945 711 aaKnown RBP eCLIP18.82■□□□□ 0.62e-12■■■□□ 17
ECHDC1-214ENST00000474289 FEM1CQ96JP0 617 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 KCTD15Q96SI1 283 aaPredicted RBP18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 FTHL17Q9BXU8 183 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 LRRC40Q9H9A6 602 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 NANOGQ9H9S0 305 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 CCM2LQ9NUG4 571 aaPredicted RBP18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 TSPAN16Q9UKR8 245 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 CTDP1Q9Y5B0 961 aaPredicted RBP18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 CPQQ9Y646 472 aa18.82■□□□□ 0.6
ECHDC1-214ENST00000474289 TRPC5OSA6NMA1 111 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 KPNA4O00629 521 aaPredicted RBP18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 PHGDHO43175 533 aaKnown RBP18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 TPST1O60507 370 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 USP12O75317 370 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 DDHD2O94830 711 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 IL18RAPO95256 599 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 PFKMP08237 780 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 SAT1P21673 171 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 SLC7A5P1Q8MH63 180 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 CCNYL1Q8N7R7 359 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 STYXQ8WUJ0 223 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 P2RY11Q96G91 374 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 DNAI2Q9GZS0 605 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 ZFYVE28Q9HCC9 887 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 AGPAT4Q9NRZ5 378 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 RNF146Q9NTX7 359 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 SEPT10Q9P0V9 454 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 DAPK2Q9UIK4 370 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 AP4E1Q9UPM8 1137 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 MRASO14807 208 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 DLX3O60479 287 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 B4GALT4O60513 344 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 POLR2IP36954 125 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms