RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 Q6ZNB5 142 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 MRPL43Q8N983 215 aaKnown RBP18.25■□□□□ 0.51
VARS2-206ENST00000473916 EXOC2Q96KP1 924 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 SRPK1Q96SB4 655 aaKnown RBP18.25■□□□□ 0.51
VARS2-206ENST00000473916 ELAC2Q9BQ52 826 aaKnown RBP18.25■□□□□ 0.51
VARS2-206ENST00000473916 ATP13A1Q9HD20 1204 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 IARS2Q9NSE4 1012 aaKnown RBP18.25■□□□□ 0.51
VARS2-206ENST00000473916 STOML2Q9UJZ1 356 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 ASB3Q9Y575 518 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 ITGA2BP08514 1039 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 ARNTP27540 789 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 CLCN4P51793 760 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 DNAJC3Q13217 504 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 PCID2Q5JVF3 399 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 CGB2Q6NT52 195 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 PKN3Q6P5Z2 889 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 FAM47EQ6ZV65 393 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 CARNMT1Q8N4J0 409 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 MRPS31Q92665 395 aaKnown RBP18.24■□□□□ 0.51
VARS2-206ENST00000473916 TADA1Q96BN2 335 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 ALKBH8Q96BT7 664 aaKnown RBP18.24■□□□□ 0.51
VARS2-206ENST00000473916 TCEAL4Q96EI5 215 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 SLCO1B3Q9NPD5 702 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 STK39Q9UEW8 545 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 TCAF1Q9Y4C2 921 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 REV3LO60673 3130 aa18.24■□□□□ 0.51
VARS2-206ENST00000473916 E2F8A0AVK6 867 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 CBX4O00257 560 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 EBAG9O00559 213 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 TPP1O14773 563 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 SNAP91O60641 907 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 C1RP00736 705 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 PRKCGP05129 697 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 MZF1P28698 734 aaPredicted RBP18.23■□□□□ 0.51
VARS2-206ENST00000473916 CCNFP41002 786 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 ETV4P43268 484 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 SERPINB9P50453 376 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 OXCT1P55809 520 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 LGSNQ5TDP6 509 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 LINGO4Q6UY18 593 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 CCDC149Q6ZUS6 474 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 CHST9Q7L1S5 443 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 STRA8Q7Z7C7 330 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 ACVR1CQ8NER5 493 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 MTBPQ96DY7 904 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 EMILIN2Q9BXX0 1053 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 TLR9Q9NR96 1032 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 CFAP97Q9P2B7 532 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 TBC1D30Q9Y2I9 924 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 IRAK3Q9Y616 596 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 TRANK1O15050 2925 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 ILVBLA1L0T0 632 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 MAGEB16A2A368 324 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 COPEO14579 308 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 GRM6O15303 877 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 KDELR3O43731 214 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 MSLNQ13421 630 aaPredicted RBP18.23■□□□□ 0.51
VARS2-206ENST00000473916 PDK4Q16654 411 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 SIRPB2Q5JXA9 342 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 BBS7Q8IWZ6 715 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 NDUFAF2Q8N183 169 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 MICAL1Q8TDZ2 1067 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 SLC46A2Q9BY10 475 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 POLR1EQ9GZS1 481 aaKnown RBP18.23■□□□□ 0.51
VARS2-206ENST00000473916 MUC3BQ9H195 1237 aa18.23■□□□□ 0.51
VARS2-206ENST00000473916 UBA2Q9UBT2 640 aaPredicted RBP18.23■□□□□ 0.51
VARS2-206ENST00000473916 GFRA2O00451 464 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 TM9SF1O15321 606 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 ATXN1LP0C7T5 689 aaKnown RBP18.22■□□□□ 0.51
VARS2-206ENST00000473916 GP5P40197 560 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 PGGT1BP53609 377 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 GKAP1Q5VSY0 366 aaPredicted RBP18.22■□□□□ 0.51
VARS2-206ENST00000473916 PIGWQ7Z7B1 504 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 CMC1Q7Z7K0 106 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 PPHLN1Q8NEY8 458 aaKnown RBP18.22■□□□□ 0.51
VARS2-206ENST00000473916 PTPRN2Q92932 1015 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 PPP1R2P1Q96PQ5 205 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 ACE2Q9BYF1 805 aaPredicted RBP18.22■□□□□ 0.51
VARS2-206ENST00000473916 PLK2Q9NYY3 685 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 CCL26Q9Y258 94 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 CEP290O15078 2479 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 ATG2AQ2TAZ0 1938 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 AP3B1O00203 1094 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 VAPBO95292 243 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 CD160O95971 181 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 EPCAMP16422 314 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 ARF5P84085 180 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 NAB1Q13506 487 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 FRG1Q14331 258 aaKnown RBP18.22■□□□□ 0.51
VARS2-206ENST00000473916 GALNT3Q14435 633 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 SEPT7Q16181 437 aaKnown RBP18.22■□□□□ 0.51
VARS2-206ENST00000473916 CNGA3Q16281 694 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 PPM1JQ5JR12 505 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 PPM1LQ5SGD2 360 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 C9orf50Q5SZB4 431 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 SETD3Q86TU7 594 aaPredicted RBP18.22■□□□□ 0.51
VARS2-206ENST00000473916 PNPLA1Q8N8W4 532 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 RIN3Q8TB24 985 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 THOC1Q96FV9 657 aaKnown RBP18.22■□□□□ 0.51
VARS2-206ENST00000473916 RBBP8Q99708 897 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms