RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 AP1B1Q10567 949 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 SNX1Q13596 522 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 E2F5Q15329 346 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 CSRP2Q16527 193 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 PTPRNQ16849 979 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 PLK5Q496M5 336 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 TEX44Q53QW1 395 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 SYDE1Q6ZW31 735 aaPredicted RBP9.25□□□□□ -0.93
SMG5-203ENST00000473643 TRMT11Q7Z4G4 463 aaKnown RBP9.25□□□□□ -0.93
SMG5-203ENST00000473643 MDGA1Q8NFP4 955 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 RMDN1Q96DB5 314 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 MRGPRX3Q96LB0 322 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 PSKH2Q96QS6 385 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 FERMT1Q9BQL6 677 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 TMEM121Q9BTD3 319 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 CARD6Q9BX69 1037 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 DDX47Q9H0S4 455 aaKnown RBP9.25□□□□□ -0.93
SMG5-203ENST00000473643 SP110Q9HB58 689 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 CD248Q9HCU0 757 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 ZDHHC4Q9NPG8 344 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 DLL3Q9NYJ7 618 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 UBA2Q9UBT2 640 aaPredicted RBP9.25□□□□□ -0.93
SMG5-203ENST00000473643 MYOFQ9NZM1 2061 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 DOCK4Q8N1I0 1966 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 PRR5-ARHGAP8B1AHC4 643 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 KCNK1O00180 336 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 NPC1O15118 1278 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 KCNN4O15554 427 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 ATP9BO43861 1147 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 FOXD2O60548 495 aaPredicted RBP9.24□□□□□ -0.93
SMG5-203ENST00000473643 MT-CO1P00395 513 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 JCHAINP01591 159 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 PTPN3P26045 913 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 NTSR1P30989 418 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 HSPA9P38646 679 aaKnown RBP9.24□□□□□ -0.93
SMG5-203ENST00000473643 SERPINH1P50454 418 aaKnown RBP9.24□□□□□ -0.93
SMG5-203ENST00000473643 TUBB4BP68371 445 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 ARHGAP8P85298 464 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 C2orf54Q08AI8 447 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 NSUN2Q08J23 767 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMG5-203ENST00000473643 SLC10A7Q0GE19 358 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 ENPP2Q13822 863 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 DHX34Q14147 1143 aaKnown RBP9.24□□□□□ -0.93
SMG5-203ENST00000473643 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
SMG5-203ENST00000473643 CYTH1Q15438 398 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 P3H1Q32P28 736 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 USP39Q53GS9 565 aaKnown RBP9.24□□□□□ -0.93
SMG5-203ENST00000473643 PLA2G2CQ5R387 149 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 MARC1Q5VT66 337 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 EGFLAMQ63HQ2 1017 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 ALG1LQ6GMV1 187 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 ANO7Q6IWH7 933 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 C4orf22Q6V702 233 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 MAATS1Q7Z4T9 603 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 C11orf74Q86VG3 221 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 KLHL7Q8IXQ5 586 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 PLPP6Q8IY26 295 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 SH2D3CQ8N5H7 860 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 CNTD1Q8N815 330 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 ZNF513Q8N8E2 541 aaPredicted RBP9.24□□□□□ -0.93
SMG5-203ENST00000473643 FAM71DQ8N9W8 422 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 GRK7Q8WTQ7 553 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 LRRN4Q8WUT4 740 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 NSMCE1Q8WV22 266 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 UCMAQ8WVF2 138 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 ISG20Q96AZ6 181 aaKnown RBP9.24□□□□□ -0.93
SMG5-203ENST00000473643 MYO19Q96H55 970 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 ZNF419Q96HQ0 510 aaPredicted RBP9.24□□□□□ -0.93
SMG5-203ENST00000473643 TEKT5Q96M29 485 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 SPATA13Q96N96 652 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 ACOX2Q99424 681 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 KRT12Q99456 494 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 GABRG3Q99928 467 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 CEP44Q9C0F1 390 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 DUSP15Q9H1R2 295 aaPredicted RBP9.24□□□□□ -0.93
SMG5-203ENST00000473643 C10orf88Q9H8K7 445 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 POLMQ9NP87 494 aaPredicted RBP9.24□□□□□ -0.93
SMG5-203ENST00000473643 SEMA4GQ9NTN9 838 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 THAP10Q9P2Z0 257 aaPredicted RBP9.24□□□□□ -0.93
SMG5-203ENST00000473643 SEPT3Q9UH03 358 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 TRHDEQ9UKU6 1024 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 PLA2G4CQ9UP65 541 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 ERVW-1Q9UQF0 538 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 ATP8A1Q9Y2Q0 1164 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 PCDHGA5Q9Y5G8 931 aa9.24□□□□□ -0.93
SMG5-203ENST00000473643 FAM187AA6NFU0 413 aa9.23□□□□□ -0.93
SMG5-203ENST00000473643 RNF103O00237 685 aa9.23□□□□□ -0.93
SMG5-203ENST00000473643 SMAD6O43541 496 aaKnown RBP9.23□□□□□ -0.93
SMG5-203ENST00000473643 OPHN1O60890 802 aa9.23□□□□□ -0.93
SMG5-203ENST00000473643 ZNF821O75541 412 aaPredicted RBP9.23□□□□□ -0.93
SMG5-203ENST00000473643 STK10O94804 968 aaKnown RBP9.23□□□□□ -0.93
SMG5-203ENST00000473643 RHOBTB1O94844 696 aa9.23□□□□□ -0.93
SMG5-203ENST00000473643 EPN2O95208 641 aa9.23□□□□□ -0.93
SMG5-203ENST00000473643 ECEL1O95672 775 aa9.23□□□□□ -0.93
SMG5-203ENST00000473643 GAS8O95995 478 aa9.23□□□□□ -0.93
SMG5-203ENST00000473643 SRCP12931 536 aa9.23□□□□□ -0.93
SMG5-203ENST00000473643 CR2P20023 1033 aa9.23□□□□□ -0.93
SMG5-203ENST00000473643 SDHBP21912 280 aa9.23□□□□□ -0.93
SMG5-203ENST00000473643 NNMTP40261 264 aa9.23□□□□□ -0.93
SMG5-203ENST00000473643 CTSOP43234 321 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms