RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ASNSD1Q9NWL6 643 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 CTNND2Q9UQB3 1225 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 CSNK1G3Q9Y6M4 447 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 RP1P56715 2156 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 YY2O15391 372 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 HSF2BPO75031 334 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 PRNPP04156 253 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 GLI1P08151 1106 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 FAM87AP0C7U9 286 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 ALPPL2P10696 532 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 TSHRP16473 764 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 ITGB7P26010 798 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 SLC5A2P31639 672 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 L1CAMP32004 1257 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 CLCN1P35523 988 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 FLT3P36888 993 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 ETV5P41161 510 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 SERPINH1P50454 418 aaKnown RBP9.79□□□□□ -0.84
MCF2L-223ENST00000473345 NEK3P51956 506 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 ADKP55263 362 aaKnown RBP9.79□□□□□ -0.84
MCF2L-223ENST00000473345 MARSP56192 900 aaKnown RBP9.79□□□□□ -0.84
MCF2L-223ENST00000473345 CYP4F2P78329 520 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 ARHGAP44Q17R89 818 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 COLEC12Q5KU26 742 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 TRIM65Q6PJ69 517 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 CCDC81Q6ZN84 652 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 RBM44Q6ZP01 1051 aaKnown RBP9.79□□□□□ -0.84
MCF2L-223ENST00000473345 SLC26A9Q7LBE3 791 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 VASH2Q86V25 355 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 LURAP1LQ8IV03 231 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 TP53I13Q8NBR0 393 aaPredicted RBP9.79□□□□□ -0.84
MCF2L-223ENST00000473345 SHC3Q92529 594 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 RNF34Q969K3 372 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 DHTKD1Q96HY7 919 aaPredicted RBP9.79□□□□□ -0.84
MCF2L-223ENST00000473345 LENG8Q96PV6 779 aaPredicted RBP9.79□□□□□ -0.84
MCF2L-223ENST00000473345 DUSP23Q9BVJ7 150 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 TM6SF2Q9BZW4 377 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 USP29Q9HBJ7 922 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 RMND1Q9NWS8 449 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 SALL4Q9UJQ4 1053 aa9.79□□□□□ -0.84
MCF2L-223ENST00000473345 NEMP2A6NFY4 417 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 FAM72CH0Y354 149 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 BIN1O00499 593 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 AREL1O15033 823 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 AP1G1O43747 822 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 AFPP02771 609 aaKnown RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 SLC2A3P11169 496 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 ITIH1P19827 911 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 RBMS1P29558 406 aaKnown RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 NOS2P35228 1153 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 UGT1A5P35504 534 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 RABIFP47224 123 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 SULT1E1P49888 294 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 DUSP3P51452 185 aaPredicted RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 ARSDP51689 593 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 OXCT1P55809 520 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 RNASE9P60153 205 aaKnown RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 RPS21P63220 83 aaKnown RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 CCL7P80098 99 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 SLC6A3Q01959 620 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 NR0B2Q15466 257 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 CARD16Q5EG05 197 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 PRRT3Q5FWE3 981 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 EFHC1Q5JVL4 640 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 C6orf132Q5T0Z8 1188 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 FAM72AQ5TYM5 149 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 FAM72DQ6L9T8 149 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 KIAA1161Q6NSJ0 714 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 C11orf57Q6ZUT1 292 aaPredicted RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 SETD3Q86TU7 594 aaPredicted RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 SLC47A2Q86VL8 602 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 FAM72BQ86X60 149 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 IRF2BP1Q8IU81 584 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 PHACTR4Q8IZ21 702 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 ZNF397Q8NF99 534 aaPredicted RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 WDR36Q8NI36 951 aaKnown RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 SMARCE1Q969G3 411 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 PMEPA1Q969W9 287 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 CCNL2Q96S94 520 aaPredicted RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 HEPHQ9BQS7 1158 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 SPON2Q9BUD6 331 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 C2orf49Q9BVC5 232 aaPredicted RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 KLC2Q9H0B6 622 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 ZDHHC6Q9H6R6 413 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 STARD5Q9NSY2 213 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 FOXJ2Q9P0K8 574 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 SIRPGQ9P1W8 387 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 APOBEC3BQ9UH17 382 aaKnown RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 IL17BQ9UHF5 180 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 SLC12A6Q9UHW9 1150 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 ATXN7L1Q9ULK2 861 aaPredicted RBP9.78□□□□□ -0.84
MCF2L-223ENST00000473345 PCDHGC3Q9UN70 934 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 COQ6Q9Y2Z9 468 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 PIEZO2Q9H5I5 2752 aa9.78□□□□□ -0.84
MCF2L-223ENST00000473345 TRPM6Q9BX84 2022 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 CCDC187A0A096LP49 1063 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 C16orf96A6NNT2 1141 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 LMO7DNF2Z398 122 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 TPP1O14773 563 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 MMP20O60882 483 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms