RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PBX3P40426 434 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 CDKN2BP42772 138 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 HNRNPFP52597 415 aaKnown RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 FAM189BP81408 668 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 MRPS22P82650 360 aaKnown RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 KRT76Q01546 638 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 KLF10Q13118 480 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 PDK1Q15118 436 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 MGAT5BQ3V5L5 792 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 FASTKD1Q53R41 847 aaKnown RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 FAXCQ5TGI0 409 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 EGFLAMQ63HQ2 1017 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 MBLAC2Q68D91 279 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 NANOGP8Q6NSW7 305 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 XRRA1Q6P2D8 792 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 PAOXQ6QHF9 649 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 GALNT4Q8N4A0 578 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 PDCD6IPQ8WUM4 868 aaKnown RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 TMEM40Q8WWA1 233 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 CPA5Q8WXQ8 436 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 HSPH1Q92598 858 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 GPRASP2Q96D09 838 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 NSMCE3Q96MG7 304 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 CTRCQ99895 268 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 C1orf50Q9BV19 199 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 C20orf27Q9GZN8 174 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 PCIF1Q9H4Z3 704 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 RPF2Q9H7B2 306 aaKnown RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 RGS18Q9NS28 235 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 OLAHQ9NV23 265 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 NCKIPSDQ9NZQ3 722 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 EBF1Q9UH73 591 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 HEMK1Q9Y5R4 338 aaPredicted RBP10.24□□□□□ -0.77
APTX-216ENST00000472896 UBIAD1Q9Y5Z9 338 aa10.24□□□□□ -0.77
APTX-216ENST00000472896 VPS13AQ96RL7 3174 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 TRIM64A6NGJ6 449 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 M0QZ92 97 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 GIPC1O14908 333 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 SPTLC1O15269 473 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 CHADO15335 359 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 UGT1A9O60656 530 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 TOM1L1O75674 476 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 TMEM63AO94886 807 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 UGT1A6P19224 532 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 UGT1A1P22309 533 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 UGT1A4P22310 534 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 ME2P23368 584 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 UGT1A3P35503 534 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 UGT1A5P35504 534 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 GSSP48637 474 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 GRSF1Q12849 480 aaKnown RBP eCLIP10.23□□□□□ -0.77
APTX-216ENST00000472896 RFTN1Q14699 578 aaPredicted RBP10.23□□□□□ -0.77
APTX-216ENST00000472896 HERC3Q15034 1050 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 DCAF6Q58WW2 860 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 PIGGQ5H8A4 983 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 POLNQ7Z5Q5 900 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 PGAM4Q8N0Y7 254 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 LILRA2Q8N149 483 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 PPM1NQ8N819 430 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 KYQ8NBH2 561 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 RP9Q8TA86 221 aaKnown RBP10.23□□□□□ -0.77
APTX-216ENST00000472896 LRRC39Q96DD0 335 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 ZNF778Q96MU6 729 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 ZNF641Q96N77 438 aaPredicted RBP10.23□□□□□ -0.77
APTX-216ENST00000472896 CASD1Q96PB1 797 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 ARPC5LQ9BPX5 153 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 TUBA1CQ9BQE3 449 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 TMEM79Q9BSE2 394 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 ZNF395Q9H8N7 513 aaPredicted RBP10.23□□□□□ -0.77
APTX-216ENST00000472896 UGT1A7Q9HAW7 530 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 UGT1A10Q9HAW8 530 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 UGT1A8Q9HAW9 530 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 ENTPD7Q9NQZ7 604 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 DKK3Q9UBP4 350 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 IPO11Q9UI26 975 aaKnown RBP10.23□□□□□ -0.77
APTX-216ENST00000472896 ST3GAL5Q9UNP4 418 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 ERVK-11Q9UQG0 969 aa10.23□□□□□ -0.77
APTX-216ENST00000472896 SMIM35A0A1B0GVV1 85 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 DYTNA2CJ06 578 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 RGSL1A5PLK6 1076 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 ARHGEF35A5YM69 484 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 FAM86B1E9PN63 330 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 KDM1AO60341 852 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 GLRA3O75311 464 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 GABBR2O75899 941 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 C1QAP02745 245 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 FAM86B2P0C5J1 330 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 FGF3P11487 239 aaPredicted RBP10.22□□□□□ -0.77
APTX-216ENST00000472896 NCF2P19878 526 aaPredicted RBP10.22□□□□□ -0.77
APTX-216ENST00000472896 JAK1P23458 1154 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 PCYT1AP49585 367 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 HARS2P49590 506 aaKnown RBP10.22□□□□□ -0.77
APTX-216ENST00000472896 NUMBP49757 651 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 HK2P52789 917 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 ATP6V0D1P61421 351 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 NOMO3P69849 1222 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 GAD2Q05329 585 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 CAMK2BQ13554 666 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 DPYSL3Q14195 570 aa10.22□□□□□ -0.77
APTX-216ENST00000472896 PIGHQ14442 188 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms