RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 AADACL2Q6P093 401 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 SLC36A4Q6YBV0 504 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 SLC13A5Q86YT5 568 aaPredicted RBP20.27■□□□□ 0.84
SF1-213ENST00000472725 TSEN2Q8NCE0 465 aaKnown RBP20.27■□□□□ 0.84
SF1-213ENST00000472725 PIP4K2CQ8TBX8 421 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 ACTL9Q8TC94 416 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 HCAR2Q8TDS4 363 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 GAB3Q8WWW8 586 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 VAT1Q99536 393 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 IL12RB2Q99665 862 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 HERPUD2Q9BSE4 406 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 SEMA4AQ9H3S1 761 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 FZD4Q9ULV1 537 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 NCKAP1Q9Y2A7 1128 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 ZKSCAN5Q9Y2L8 839 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 WASF2Q9Y6W5 498 aa20.27■□□□□ 0.84
SF1-213ENST00000472725 H0Y858 1186 aa20.26■□□□□ 0.83
SF1-213ENST00000472725 SLC7A4O43246 635 aa20.26■□□□□ 0.83
SF1-213ENST00000472725 NEBLO76041 1014 aa20.26■□□□□ 0.83
SF1-213ENST00000472725 PXNP49023 591 aaPredicted RBP20.26■□□□□ 0.83
SF1-213ENST00000472725 GNG11P61952 73 aa20.26■□□□□ 0.83
SF1-213ENST00000472725 OTUD4Q01804 1114 aaKnown RBP20.26■□□□□ 0.83
SF1-213ENST00000472725 MAP7D1Q3KQU3 841 aa20.26■□□□□ 0.83
SF1-213ENST00000472725 SLC45A4Q5BKX6 768 aa20.26■□□□□ 0.83
SF1-213ENST00000472725 RYBPQ8N488 228 aaPredicted RBP20.26■□□□□ 0.83
SF1-213ENST00000472725 CHST14Q8NCH0 376 aa20.26■□□□□ 0.83
SF1-213ENST00000472725 FAM131CQ96AQ9 280 aa20.26■□□□□ 0.83
SF1-213ENST00000472725 ZNF641Q96N77 438 aaPredicted RBP20.26■□□□□ 0.83
SF1-213ENST00000472725 QKIQ96PU8 341 aaKnown RBP eCLIP20.26■□□□□ 0.83
SF1-213ENST00000472725 NUDCD1Q96RS6 583 aa20.26■□□□□ 0.83
SF1-213ENST00000472725 TPSD1Q9BZJ3 242 aa20.26■□□□□ 0.83
SF1-213ENST00000472725 SAE1Q9UBE0 346 aaPredicted RBP20.26■□□□□ 0.83
SF1-213ENST00000472725 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.25■□□□□ 0.83
SF1-213ENST00000472725 ENC1O14682 589 aa20.25■□□□□ 0.83
SF1-213ENST00000472725 LEFTY1O75610 366 aa20.25■□□□□ 0.83
SF1-213ENST00000472725 RPP40O75818 363 aaKnown RBP20.25■□□□□ 0.83
SF1-213ENST00000472725 CTSLP07711 333 aa20.25■□□□□ 0.83
SF1-213ENST00000472725 PRLRP16471 622 aa20.25■□□□□ 0.83
SF1-213ENST00000472725 CR2P20023 1033 aa20.25■□□□□ 0.83
SF1-213ENST00000472725 PSMD8P48556 350 aa20.25■□□□□ 0.83
SF1-213ENST00000472725 TPMTP51580 245 aa20.25■□□□□ 0.83
SF1-213ENST00000472725 ARSIQ5FYB1 569 aa20.25■□□□□ 0.83
SF1-213ENST00000472725 SPDYCQ5MJ68 293 aa20.25■□□□□ 0.83
SF1-213ENST00000472725 SRLQ86TD4 932 aa20.25■□□□□ 0.83
SF1-213ENST00000472725 CDKL3Q8IVW4 592 aaPredicted RBP20.25■□□□□ 0.83
SF1-213ENST00000472725 POLR1EQ9GZS1 481 aaKnown RBP20.25■□□□□ 0.83
SF1-213ENST00000472725 SLC6A17Q9H1V8 727 aa20.25■□□□□ 0.83
SF1-213ENST00000472725 DYRK4Q9NR20 520 aa20.25■□□□□ 0.83
SF1-213ENST00000472725 RBM22Q9NW64 420 aaKnown RBP eCLIP20.25■□□□□ 0.831e-14■■■■■ 79.6
SF1-213ENST00000472725 TTC7AQ9ULT0 858 aaPredicted RBP20.25■□□□□ 0.83
SF1-213ENST00000472725 A0A1W2PQ67 120 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 BCLAF3A2AJT9 711 aaKnown RBP20.24■□□□□ 0.83
SF1-213ENST00000472725 KRIT1O00522 736 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 MID1O15344 667 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 RBP3P10745 1247 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 TCP1P17987 556 aaKnown RBP20.24■□□□□ 0.83
SF1-213ENST00000472725 ITGB7P26010 798 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 EIF3EP60228 445 aaKnown RBP20.24■□□□□ 0.83
SF1-213ENST00000472725 ZNF805Q5CZA5 627 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 ATXN7L2Q5T6C5 722 aaPredicted RBP20.24■□□□□ 0.83
SF1-213ENST00000472725 ZC3H18Q86VM9 953 aaKnown RBP20.24■□□□□ 0.83
SF1-213ENST00000472725 NAP1L3Q99457 506 aaPredicted RBP20.24■□□□□ 0.83
SF1-213ENST00000472725 OMDQ99983 421 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 HDAC8Q9BY41 377 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 PCED1AQ9H1Q7 454 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 KDM4CQ9H3R0 1056 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 ZDHHC6Q9H6R6 413 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 ATP13A3Q9H7F0 1226 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 SGK2Q9HBY8 427 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 HOMER3Q9NSC5 361 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 FBXL12Q9NXK8 326 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 DKK3Q9UBP4 350 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 EVLQ9UI08 416 aaPredicted RBP20.24■□□□□ 0.83
SF1-213ENST00000472725 SARDHQ9UL12 918 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 SNX12Q9UMY4 172 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 ATP8A1Q9Y2Q0 1164 aa20.24■□□□□ 0.83
SF1-213ENST00000472725 IGHV1OR15-9A0A0B4J2B8 117 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 H7C0C1 242 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 KCNK1O00180 336 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 KPNA3O00505 521 aaPredicted RBP20.23■□□□□ 0.83
SF1-213ENST00000472725 CEP104O60308 925 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 ATP1A1P05023 1023 aaKnown RBP20.23■□□□□ 0.83
SF1-213ENST00000472725 SERPINA4P29622 427 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 CD6P30203 668 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 ATP5OP48047 213 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 SCNN1BP51168 640 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 SUOXP51687 545 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 TEX44Q53QW1 395 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 GDPD4Q6W3E5 623 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 PGBD5Q8N414 524 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 RASGEF1CQ8N431 466 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 GRIN3AQ8TCU5 1115 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 HTR3CQ8WXA8 447 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 SPOCK2Q92563 424 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 ERLEC1Q96DZ1 483 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 NT5MQ9NPB1 228 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 SCUBE2Q9NQ36 999 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 WSB2Q9NYS7 404 aaPredicted RBP20.23■□□□□ 0.83
SF1-213ENST00000472725 TRHDEQ9UKU6 1024 aa20.23■□□□□ 0.83
SF1-213ENST00000472725 TPX2Q9ULW0 747 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms