RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 FAM171BQ6P995 826 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 KCNK18Q7Z418 384 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 SPRED1Q7Z699 444 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 TMEM150AQ86TG1 271 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 FAM124AQ86V42 546 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 SFR1Q86XK3 245 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 SCN4BQ8IWT1 228 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 PALM2Q8IXS6 379 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 NUP93Q8N1F7 819 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 TTC39CQ8N584 583 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 ZNF557Q8N988 423 aaPredicted RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 OLIG1Q8TAK6 271 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 MYCBPAPQ8TBZ2 947 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 UCMAQ8WVF2 138 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 TCEAL3Q969E4 200 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 MYLPFQ96A32 169 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 SYAP1Q96A49 352 aaPredicted RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 CHFRQ96EP1 664 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 SMARCD1Q96GM5 515 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 HPDLQ96IR7 371 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 WWC2-AS2Q96NR7 200 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 IPO9Q96P70 1041 aaKnown RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 LRRC3BQ96PB8 259 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 MMS19Q96T76 1030 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 TPSD1Q9BZJ3 242 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 IMPG2Q9BZV3 1241 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 MTMR12Q9C0I1 747 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 HAPLN2Q9GZV7 340 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 TMEM168Q9H0V1 697 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 PCED1AQ9H1Q7 454 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 TNMDQ9H2S6 317 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 POLD4Q9HCU8 107 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 DMAP1Q9NPF5 467 aaPredicted RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 INTS13Q9NVM9 706 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 GCNT4Q9P109 453 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 SAMD15Q9P1V8 674 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 ARHGAP20Q9P2F6 1191 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 WDR35Q9P2L0 1181 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 PILRBQ9UKJ0 227 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 GTF3C4Q9UKN8 822 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 CNOT11Q9UKZ1 510 aaKnown RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 APOBEC2Q9Y235 224 aaKnown RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 ZNF510Q9Y2H8 683 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 CPQQ9Y646 472 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 WNT6Q9Y6F9 365 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 TICRRQ7Z2Z1 1910 aa3.69□□□□□ -1.82
XRN1-209ENST00000472625 MAP1BP46821 2468 aaKnown RBP3.69□□□□□ -1.82
XRN1-209ENST00000472625 COL4A3Q01955 1670 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 CITO14578 2027 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 ATRXP46100 2492 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 A0A087X0B3 334 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 FRMD3A2A2Y4 597 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 C2orf78A6NCI8 922 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 CAPN8A6NHC0 703 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 MEI4A8MW99 385 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 A8MXQ7 604 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 F8VP50 259 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 K7EQS6 105 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 PPEF2O14830 753 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 GPR42O15529 346 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 STX6O43752 255 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 KLF8O95600 359 aaPredicted RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 ZNF883P0CG24 379 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 ZNF888P0CJ79 500 aaPredicted RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 IDEP14735 1019 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 ENGP17813 658 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 TNNI1P19237 187 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 BDNFP23560 247 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 ACAT1P24752 427 aaKnown RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 ADSSP30520 456 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 NTSR1P30989 418 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 CHKAP35790 457 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 GNL1P36915 607 aaPredicted RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 OPRD1P41143 372 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 NFATC3Q12968 1075 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 SEMA3BQ13214 749 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 DHCR24Q15392 516 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 CDSNQ15517 529 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 CCDC6Q16204 474 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 IL17AQ16552 155 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 SNRNP35Q16560 246 aaKnown RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 TBR1Q16650 682 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 C21orf62-AS1Q17RA5 79 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 SOWAHAQ2M3V2 549 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 ANO4Q32M45 955 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 C10orf76Q5T2E6 689 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 SNX30Q5VWJ9 437 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 TMEM200BQ69YZ2 307 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 GRAMD4Q6IC98 578 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 ESRP1Q6NXG1 681 aaKnown RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 ZNF585AQ6P3V2 769 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 KLHDC10Q6PID8 442 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 LARP4Q71RC2 724 aaKnown RBP eCLIP3.68□□□□□ -1.82
XRN1-209ENST00000472625 GPR155Q7Z3F1 870 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 FILIP1Q7Z7B0 1213 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 LRRTM3Q86VH5 581 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 TTC30AQ86WT1 665 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 KBTBD2Q8IY47 623 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 CHPFQ8IZ52 775 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 ARHGAP18Q8N392 663 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms