RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 METTL12A8MUP2 240 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 MEI4A8MW99 385 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 TIMM44O43615 452 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 BUB1O43683 1085 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 CREB3O43889 395 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 GJB3O75712 270 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 LRIG2O94898 1065 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 CEACAM1P13688 526 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 CD59P13987 128 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 ACSL1P33121 698 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 MAN1A1P33908 653 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 DPP6P42658 865 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 CDH4P55283 916 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 TAS2R40P59535 323 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 RPS14P62263 151 aaKnown RBP9.35□□□□□ -0.91
SMC4-213ENST00000472282 SHC2P98077 582 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 PLEKHG6Q3KR16 790 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 KCNT1Q5JUK3 1230 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 ERMARDQ5T6L9 678 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 RWDD4Q6NW29 188 aaKnown RBP9.35□□□□□ -0.91
SMC4-213ENST00000472282 TFAP2DQ7Z6R9 452 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 PIP4P1Q86T03 277 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 CCDC117Q8IWD4 279 aaPredicted RBP9.35□□□□□ -0.91
SMC4-213ENST00000472282 APCDD1Q8J025 514 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 FIBINQ8TAL6 211 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 CEP76Q8TAP6 659 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 DNASE2BQ8WZ79 361 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 HSPH1Q92598 858 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 TBC1D31Q96DN5 1066 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 CAMK1GQ96NX5 476 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 ZYG11BQ9C0D3 744 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 GOLPH3Q9H4A6 298 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 C6orf106Q9H6K1 298 aaPredicted RBP9.35□□□□□ -0.91
SMC4-213ENST00000472282 IL21RQ9HBE5 538 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 TRIM10Q9UDY6 481 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 EIF2B4Q9UI10 523 aaKnown RBP9.35□□□□□ -0.91
SMC4-213ENST00000472282 LCMT1Q9UIC8 334 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 SALL4Q9UJQ4 1053 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 NEU3Q9UQ49 428 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 DUSP10Q9Y6W6 482 aa9.35□□□□□ -0.91
SMC4-213ENST00000472282 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.34□□□□□ -0.91
SMC4-213ENST00000472282 MACROD2A1Z1Q3 448 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 DRGXA6NNA5 263 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 BTNL10A8MVZ5 291 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 C1QTNF9BB2RNN3 333 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 BUB1BO60566 1050 aaPredicted RBP9.34□□□□□ -0.91
SMC4-213ENST00000472282 SIN3BO75182 1162 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 CLDN11O75508 207 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 RHOCP08134 193 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 DLDP09622 509 aaKnown RBP9.34□□□□□ -0.91
SMC4-213ENST00000472282 C1QTNF9P0C862 333 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 RARAP10276 462 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 POLR2EP19388 210 aaKnown RBP9.34□□□□□ -0.91
SMC4-213ENST00000472282 EPHB2P29323 1055 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 L1CAMP32004 1257 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 CSKP41240 450 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 ARHGAP25P42331 645 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 NAP1L1P55209 391 aaKnown RBP9.34□□□□□ -0.91
SMC4-213ENST00000472282 TPI1P60174 286 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 KIF5AQ12840 1032 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 GRIK2Q13002 908 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 ZNF177Q13360 481 aaPredicted RBP9.34□□□□□ -0.91
SMC4-213ENST00000472282 HADHQ16836 314 aaKnown RBP9.34□□□□□ -0.91
SMC4-213ENST00000472282 ST3GAL2Q16842 350 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 PPP6R3Q5H9R7 873 aaPredicted RBP9.34□□□□□ -0.91
SMC4-213ENST00000472282 PITRM1Q5JRX3 1037 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 CXorf57Q6NSI4 855 aaKnown RBP9.34□□□□□ -0.91
SMC4-213ENST00000472282 TXLNBQ8N3L3 684 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 ZNF557Q8N988 423 aaPredicted RBP9.34□□□□□ -0.91
SMC4-213ENST00000472282 OR52K2Q8NGK3 314 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 TPCN2Q8NHX9 752 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 C1orf216Q8TAB5 229 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 TTC17Q96AE7 1141 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 MIR1-1HGQ9H1L0 117 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 KCNF1Q9H3M0 494 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMC4-213ENST00000472282 KLHL11Q9NVR0 708 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 PPARGC1AQ9UBK2 798 aaKnown RBP9.34□□□□□ -0.91
SMC4-213ENST00000472282 ZNF212Q9UDV6 495 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 SERGEFQ9UGK8 458 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 HYOU1Q9Y4L1 999 aa9.34□□□□□ -0.91
SMC4-213ENST00000472282 KMT2BQ9UMN6 2715 aaPredicted RBP9.33□□□□□ -0.92
SMC4-213ENST00000472282 A0A1B0GTW7 788 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 TTC34A8MYJ7 566 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 EEF2KO00418 725 aaKnown RBP9.33□□□□□ -0.92
SMC4-213ENST00000472282 SPOPO43791 374 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 HYAL3O43820 417 aaPredicted RBP9.33□□□□□ -0.92
SMC4-213ENST00000472282 SH3BP5O60239 455 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 OPHN1O60890 802 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 MOCS3O95396 460 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 CCDC175P0C221 793 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 ACADMP11310 421 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 TNNT1P13805 278 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 GOT1P17174 413 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 COMTP21964 271 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 MZF1P28698 734 aaPredicted RBP9.33□□□□□ -0.92
SMC4-213ENST00000472282 OXTRP30559 389 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 OR1E1P30953 314 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 SLC1A1P43005 524 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 MAP2K3P46734 347 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms