RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 SDC4P31431 198 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 ADRA1BP35368 520 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 SOX5P35711 763 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 HDAC4P56524 1084 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 JAM2P57087 298 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 HNRNPKP61978 463 aaKnown RBP eCLIP10□□□□□ -0.81
NUDCD3-205ENST00000472246 RPS21P63220 83 aaKnown RBP10□□□□□ -0.81
NUDCD3-205ENST00000472246 E2F1Q01094 437 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 CDR2Q01850 454 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 NRG1Q02297 640 aaPredicted RBP10□□□□□ -0.81
NUDCD3-205ENST00000472246 SLC20A2Q08357 652 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 PTP4A2Q12974 167 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 FZD2Q14332 565 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 ARL13BQ3SXY8 428 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 LRRC73Q5JTD7 316 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 ARCQ7LC44 396 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 ZNF677Q86XU0 584 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 NETO2Q8NC67 525 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 ZNF548Q8NEK5 533 aaPredicted RBP10□□□□□ -0.81
NUDCD3-205ENST00000472246 SNIP1Q8TAD8 396 aaKnown RBP10□□□□□ -0.81
NUDCD3-205ENST00000472246 ARHGEF2Q92974 986 aaKnown RBP10□□□□□ -0.81
NUDCD3-205ENST00000472246 PCDHB18PQ96TA0 734 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 FAM207AQ9NSI2 230 aaPredicted RBP10□□□□□ -0.81
NUDCD3-205ENST00000472246 TMEM51Q9NW97 253 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 TMEM248Q9NWD8 314 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 NLGN3Q9NZ94 848 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 KLF15Q9UIH9 416 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 RAI2Q9Y5P3 530 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 HS3ST3A1Q9Y663 406 aa10□□□□□ -0.81
NUDCD3-205ENST00000472246 COL27A1Q8IZC6 1860 aaPredicted RBP10□□□□□ -0.81
NUDCD3-205ENST00000472246 C16orf96A6NNT2 1141 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 K7ESM1 405 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 KRIT1O00522 736 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 SCAMP1O15126 338 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 AP1G1O43747 822 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 OPA1O60313 960 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 RAMP2O60895 175 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 CSF2P04141 144 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 PRB1P04280 392 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 UGT2B4P06133 528 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 NME1P15531 152 aaKnown RBP9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 PTPN9P43378 593 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 MAPKAPK2P49137 400 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 CCDC173Q0VFZ6 552 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 PDE1CQ14123 709 aaPredicted RBP9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 KRT31Q15323 416 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 TBC1D25Q3MII6 688 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 ZNF805Q5CZA5 627 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 ATXN7L2Q5T6C5 722 aaPredicted RBP9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 CDKAL1Q5VV42 579 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 CDCP2Q5VXM1 449 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 LRRC69Q6ZNQ3 347 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 STRADAQ7RTN6 431 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 PARGQ86W56 976 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 CACTIN-AS1Q8N1I8 211 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 PYROXD2Q8N2H3 581 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 OR2AP1Q8NGE2 309 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 FAM172AQ8WUF8 416 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 BAP1Q92560 729 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 FGF11Q92914 225 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 ISG20Q96AZ6 181 aaKnown RBP9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 TBC1D31Q96DN5 1066 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 IFT43Q96FT9 208 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 FEM1CQ96JP0 617 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 KLHL32Q96NJ5 620 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 FCRL3Q96P31 734 aaPredicted RBP9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 KLF6Q99612 283 aaPredicted RBP9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 OSBPL2Q9H1P3 480 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 PRORYQ9H606 182 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 SHROOM3Q8TF72 1996 aa9.99□□□□□ -0.81
NUDCD3-205ENST00000472246 SPTY2D1-AS1A0A0U1RR47 76 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 EIF4E1BA6NMX2 242 aaKnown RBP9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 H3BM21 787 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 NEMP1O14524 444 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 FPGTO14772 594 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 RRP8O43159 456 aaKnown RBP9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 CSO75390 466 aaKnown RBP9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 GSRP00390 522 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 MPOP05164 745 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 PLEKP08567 350 aaPredicted RBP9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 UNGP13051 313 aaPredicted RBP9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 ITIH2P19823 946 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 GPD1P21695 349 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 RFC1P35251 1148 aaPredicted RBP9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 ACTN2P35609 894 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 ETFBP38117 255 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 RABIFP47224 123 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 SNRPD1P62314 119 aaKnown RBP9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 EIF2B5Q13144 721 aaKnown RBP9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 POLD3Q15054 466 aaPredicted RBP9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 DEFB133Q30KQ1 61 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 GUSBP11Q6P575 273 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 CRTC1Q6UUV9 634 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 ZNF354CQ86Y25 554 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 DCP2Q8IU60 420 aaKnown RBP9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 RBFAQ8N0V3 343 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 FAM174AQ8TBP5 190 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 ENOX1Q8TC92 643 aaKnown RBP9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 IFI44Q8TCB0 444 aa9.98□□□□□ -0.81
NUDCD3-205ENST00000472246 LMX1AQ8TE12 382 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms