RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 FADS3Q9Y5Q0 445 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 TTC24A2A3L6 582 aaPredicted RBP8.22□□□□□ -1.09
USP48-207ENST00000471752 LRRC10BA6NIK2 292 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 TMCO5BA8MYB1 307 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 C1QTNF3-AMACRE9PGA6 284 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 PRAMEF26H0Y7S4 382 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 J3KR12 359 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 SCAMP1O15126 338 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 ALOX15BO15296 676 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 SLC7A4O43246 635 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 CCP110O43303 1012 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 BUB1BO60566 1050 aaPredicted RBP8.22□□□□□ -1.09
USP48-207ENST00000471752 MMP20O60882 483 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 UGT2B4P06133 528 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 CELA2BP08218 269 aaPredicted RBP8.22□□□□□ -1.09
USP48-207ENST00000471752 KRT3P12035 628 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 ADRB3P13945 408 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 JUPP14923 745 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 TIMP2P16035 220 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 EIF2S3P41091 472 aaKnown RBP8.22□□□□□ -1.09
USP48-207ENST00000471752 OXCT1P55809 520 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 INSM1Q01101 510 aaPredicted RBP8.22□□□□□ -1.09
USP48-207ENST00000471752 UBXN1Q04323 297 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 EIF2B5Q13144 721 aaKnown RBP8.22□□□□□ -1.09
USP48-207ENST00000471752 CYTH1Q15438 398 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 MYLK3Q32MK0 819 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 PPP1R15BQ5SWA1 713 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 C6orf118Q5T5N4 469 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 HES3Q5TGS1 186 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 SCYL2Q6P3W7 929 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 FBXL19Q6PCT2 694 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 ARHGAP36Q6ZRI8 547 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 MON1BQ7L1V2 547 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 PDZD3Q86UT5 571 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 ZSWIM9Q86XI8 627 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 SFTPA2Q8IWL1 248 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 RYBPQ8N488 228 aaPredicted RBP8.22□□□□□ -1.09
USP48-207ENST00000471752 HMCESQ96FZ2 354 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 KLHL32Q96NJ5 620 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 NAP1L5Q96NT1 182 aaPredicted RBP8.22□□□□□ -1.09
USP48-207ENST00000471752 AGPAT1Q99943 283 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 HEPHQ9BQS7 1158 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 SLC17A9Q9BYT1 436 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 ERVMER34-1Q9H9K5 563 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 PREBQ9HCU5 417 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 TMEM63CQ9P1W3 806 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 PPARGC1AQ9UBK2 798 aaKnown RBP8.22□□□□□ -1.09
USP48-207ENST00000471752 COQ6Q9Y2Z9 468 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 MFHAS1Q9Y4C4 1052 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 PCDHB1Q9Y5F3 818 aa8.22□□□□□ -1.09
USP48-207ENST00000471752 SIGLEC16A6NMB1 481 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 LGALS16A8MUM7 142 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 KRIT1O00522 736 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 GCATO75600 419 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 RFPL3O75679 317 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 PIAS2O75928 621 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 PRNPP04156 253 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 TCF4P15884 667 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 RHOQP17081 205 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 SDC4P31431 198 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 L1CAMP32004 1257 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 STAT1P42224 750 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 PTPN9P43378 593 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 RGRP47804 291 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 SNX16P57768 344 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 C1orf61Q13536 156 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 PTPRRQ15256 657 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 SETMARQ53H47 684 aaPredicted RBP8.21□□□□□ -1.1
USP48-207ENST00000471752 CRTC1Q6UUV9 634 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 ARCQ7LC44 396 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 ABI3BPQ7Z7G0 1075 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 DSG4Q86SJ6 1040 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 PHF13Q86YI8 300 aaPredicted RBP8.21□□□□□ -1.1
USP48-207ENST00000471752 RBFAQ8N0V3 343 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 AOPEPQ8N6M6 819 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 CELF6Q96J87 481 aaKnown RBP8.21□□□□□ -1.1
USP48-207ENST00000471752 EXOC2Q96KP1 924 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 PCMTD1Q96MG8 357 aaPredicted RBP8.21□□□□□ -1.1
USP48-207ENST00000471752 PEBP4Q96S96 227 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 C1QTNF2Q9BXJ5 285 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 KDM4CQ9H3R0 1056 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 GPR27Q9NS67 375 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 SEPT11Q9NVA2 429 aaKnown RBP8.21□□□□□ -1.1
USP48-207ENST00000471752 KLHL11Q9NVR0 708 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 TMEM248Q9NWD8 314 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 DNAJC28Q9NX36 388 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 FZD10Q9ULW2 581 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 DMTF1Q9Y222 760 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 BOD1L1Q8NFC6 3051 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 ADAMTS20P59510 1910 aa8.21□□□□□ -1.1
USP48-207ENST00000471752 TDRD6O60522 2096 aaKnown RBP8.2□□□□□ -1.1
USP48-207ENST00000471752 A0A0U1RQS6 177 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 RASA4BC9J798 803 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 K7ESM1 405 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 AREL1O15033 823 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 MUSKO15146 869 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 RASA4O43374 803 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 BUB1O43683 1085 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 KDELR3O43731 214 aa8.2□□□□□ -1.1
USP48-207ENST00000471752 CREB3O43889 395 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms