RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 PRPF39Q86UA1 669 aaKnown RBP19.47■□□□□ 0.71
PSPC1-203ENST00000471658 POLR1EQ9GZS1 481 aaKnown RBP19.47■□□□□ 0.71
PSPC1-203ENST00000471658 SLC25A51Q9H1U9 297 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 WNT16Q9UBV4 365 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 EVLQ9UI08 416 aaPredicted RBP19.47■□□□□ 0.71
PSPC1-203ENST00000471658 CD86P42081 329 aa19.46■□□□□ 0.71
PSPC1-203ENST00000471658 VASPP50552 380 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-203ENST00000471658 OLIG2Q13516 323 aa19.46■□□□□ 0.71
PSPC1-203ENST00000471658 SPARCL1Q14515 664 aa19.46■□□□□ 0.71
PSPC1-203ENST00000471658 IZUMO3Q5VZ72 239 aa19.46■□□□□ 0.71
PSPC1-203ENST00000471658 SIX5Q8N196 739 aa19.46■□□□□ 0.71
PSPC1-203ENST00000471658 ZNF513Q8N8E2 541 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-203ENST00000471658 CHST14Q8NCH0 376 aa19.46■□□□□ 0.71
PSPC1-203ENST00000471658 CPT1BQ92523 772 aa19.46■□□□□ 0.71
PSPC1-203ENST00000471658 PTPRN2Q92932 1015 aa19.46■□□□□ 0.71
PSPC1-203ENST00000471658 ISG20Q96AZ6 181 aaKnown RBP19.46■□□□□ 0.71
PSPC1-203ENST00000471658 IMP4Q96G21 291 aaKnown RBP19.46■□□□□ 0.71
PSPC1-203ENST00000471658 MSANTD3Q96H12 275 aa19.46■□□□□ 0.71
PSPC1-203ENST00000471658 CEP44Q9C0F1 390 aa19.46■□□□□ 0.71
PSPC1-203ENST00000471658 RAB17Q9H0T7 212 aa19.46■□□□□ 0.71
PSPC1-203ENST00000471658 TMEM245Q9H330 911 aa19.46■□□□□ 0.71
PSPC1-203ENST00000471658 MTF2Q9Y483 593 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-203ENST00000471658 MYO18AQ92614 2054 aaKnown RBP19.46■□□□□ 0.71
PSPC1-203ENST00000471658 TRIOO75962 3097 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.45■□□□□ 0.7
PSPC1-203ENST00000471658 MAN2B1O00754 1011 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 DNALI1O14645 258 aaPredicted RBP19.45■□□□□ 0.7
PSPC1-203ENST00000471658 HNRNPLP14866 589 aaKnown RBP eCLIP19.45■□□□□ 0.76e-7■■□□□ 13.2
PSPC1-203ENST00000471658 FDFT1P37268 417 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 SKOR1P84550 965 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 NSUN2Q08J23 767 aaKnown RBP eCLIP19.45■□□□□ 0.7
PSPC1-203ENST00000471658 CARD16Q5EG05 197 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 ALG1LQ6GMV1 187 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 CCDC70Q6NSX1 233 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 SERPINA13PQ6UXR4 307 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 ZNF852Q6ZMS4 543 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 DPY19L3Q6ZPD9 716 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 SRLQ86TD4 932 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.45■□□□□ 0.7
PSPC1-203ENST00000471658 RYBPQ8N488 228 aaPredicted RBP19.45■□□□□ 0.7
PSPC1-203ENST00000471658 PCDH20Q8N6Y1 951 aaKnown RBP19.45■□□□□ 0.7
PSPC1-203ENST00000471658 PDCD7Q8N8D1 485 aaKnown RBP19.45■□□□□ 0.7
PSPC1-203ENST00000471658 OR2AP1Q8NGE2 309 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 OR2A12Q8NGT7 310 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 CCHCR1Q8TD31 782 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 VOPP1Q96AW1 172 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 LRRC45Q96CN5 670 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 NUDCD1Q96RS6 583 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 SCUBE2Q9NQ36 999 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 GRHL1Q9NZI5 618 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 STON1Q9Y6Q2 735 aa19.45■□□□□ 0.7
PSPC1-203ENST00000471658 MUC22E2RYF6 1773 aaPredicted RBP19.44■□□□□ 0.7
PSPC1-203ENST00000471658 TP73O15350 636 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 HSPA9P38646 679 aaKnown RBP19.44■□□□□ 0.7
PSPC1-203ENST00000471658 ITGA8P53708 1063 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 PRKCQQ04759 706 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 SEMA5AQ13591 1074 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 CCINQ13939 588 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 RNASEH2BQ5TBB1 312 aaKnown RBP19.44■□□□□ 0.7
PSPC1-203ENST00000471658 NCEH1Q6PIU2 408 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 C4orf22Q6V702 233 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 KDELC2Q7Z4H8 507 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 METTL3Q86U44 580 aaKnown RBP19.44■□□□□ 0.7
PSPC1-203ENST00000471658 UBALD2Q8IYN6 164 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 CHPFQ8IZ52 775 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 ZNF687Q8N1G0 1237 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 SEC14L1Q92503 715 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 EXOC4Q96A65 974 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 SNF8Q96H20 258 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 HECAQ9UBI9 543 aaPredicted RBP19.44■□□□□ 0.7
PSPC1-203ENST00000471658 TPX2Q9ULW0 747 aaKnown RBP19.44■□□□□ 0.7
PSPC1-203ENST00000471658 VCANP13611 3396 aa19.44■□□□□ 0.7
PSPC1-203ENST00000471658 RNF40O75150 1001 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 PMPCBO75439 489 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 SEC31AO94979 1220 aaKnown RBP19.43■□□□□ 0.7
PSPC1-203ENST00000471658 IGSF6O95976 241 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 APRTP07741 180 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 TARSP26639 723 aaKnown RBP19.43■□□□□ 0.7
PSPC1-203ENST00000471658 CARSP49589 748 aaKnown RBP19.43■□□□□ 0.7
PSPC1-203ENST00000471658 CCNHP51946 323 aaPredicted RBP19.43■□□□□ 0.7
PSPC1-203ENST00000471658 SNRPD1P62314 119 aaKnown RBP19.43■□□□□ 0.7
PSPC1-203ENST00000471658 MYLK3Q32MK0 819 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 TJAP1Q5JTD0 557 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 KDELC1Q6UW63 502 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 KDM1BQ8NB78 822 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 IFT81Q8WYA0 676 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 TADA1Q96BN2 335 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 GDAP1L1Q96MZ0 367 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 FOXQ1Q9C009 403 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 GDF3Q9NR23 364 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 POLR3BQ9NW08 1133 aaPredicted RBP19.43■□□□□ 0.7
PSPC1-203ENST00000471658 FARP1Q9Y4F1 1045 aaPredicted RBP19.43■□□□□ 0.7
PSPC1-203ENST00000471658 PCDHGC4Q9Y5F7 938 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 ATG2BQ96BY7 2078 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 SIN3BO75182 1162 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 TMEM63AO94886 807 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 PIGNO95427 931 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 GSRP00390 522 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 GRIA1P42261 906 aa19.43■□□□□ 0.7
PSPC1-203ENST00000471658 CSNK1DP48730 415 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms