RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 BRMS1LQ5PSV4 323 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 KLHL10Q6JEL2 608 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 RETSATQ6NUM9 610 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 C22orf39Q6P5X5 142 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 IGF2-ASQ6U949 168 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 ABI3BPQ7Z7G0 1075 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 PARGQ86W56 976 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 ZDHHC17Q8IUH5 632 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 TRIM59Q8IWR1 403 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 ELOA2Q8IYF1 753 aaPredicted RBP9.32□□□□□ -0.92
CPSF4-211ENST00000471455 OR13H1Q8NG92 308 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 IFI44Q8TCB0 444 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 GRIN3AQ8TCU5 1115 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 NELFBQ8WX92 580 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 ALG14Q96F25 216 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 NAF1Q96HR8 494 aaKnown RBP9.32□□□□□ -0.92
CPSF4-211ENST00000471455 PPP1R13BQ96KQ4 1090 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 CEP44Q9C0F1 390 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 UBE2TQ9NPD8 197 aaPredicted RBP9.32□□□□□ -0.92
CPSF4-211ENST00000471455 UCKL1Q9NWZ5 548 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 IL36AQ9UHA7 158 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 IPO11Q9UI26 975 aaKnown RBP9.32□□□□□ -0.92
CPSF4-211ENST00000471455 VPS51Q9UID3 782 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 CA5BQ9Y2D0 317 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 ZDHHC9Q9Y397 364 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 OR51B4Q9Y5P0 310 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 HS3ST4Q9Y661 456 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 HS3ST3A1Q9Y663 406 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 CSNK1G3Q9Y6M4 447 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 KALRNO60229 2985 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 SPTA1P02549 2419 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 CFAP46Q8IYW2 2715 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 K7ESM1 405 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 M0QYT0 321 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 FPGTO14772 594 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 TCEA3O75764 348 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 F9P00740 461 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 NME1P15531 152 aaKnown RBP9.31□□□□□ -0.92
CPSF4-211ENST00000471455 ITGB7P26010 798 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 NOS2P35228 1153 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 MARSP56192 900 aaKnown RBP9.31□□□□□ -0.92
CPSF4-211ENST00000471455 PITX1P78337 314 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-211ENST00000471455 PAK1Q13153 545 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 SGCGQ13326 291 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 ARHGAP40Q5TG30 622 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 OR6B2Q6IFH4 312 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 TTI2Q6NXR4 508 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 ZNF783Q6ZMS7 281 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 GCNT7Q6ZNI0 430 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 RBM44Q6ZP01 1051 aaKnown RBP9.31□□□□□ -0.92
CPSF4-211ENST00000471455 Q6ZSR6 202 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 SLC26A9Q7LBE3 791 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 ARL14Q8N4G2 192 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 PCDH20Q8N6Y1 951 aaKnown RBP9.31□□□□□ -0.92
CPSF4-211ENST00000471455 C1orf131Q8NDD1 294 aaKnown RBP9.31□□□□□ -0.92
CPSF4-211ENST00000471455 ZNF548Q8NEK5 533 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-211ENST00000471455 OR2A12Q8NGT7 310 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 BTN2A2Q8WVV5 523 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 KLK6Q92876 244 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 NAT6Q93015 286 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 ARHGEF26Q96DR7 871 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 VCPIP1Q96JH7 1222 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 FEM1CQ96JP0 617 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 IL12RB2Q99665 862 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 SIK2Q9H0K1 926 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 ALG2Q9H553 416 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 FZD3Q9NPG1 666 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 CTNND2Q9UQB3 1225 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 PCDHGA8Q9Y5G5 932 aa9.31□□□□□ -0.92
CPSF4-211ENST00000471455 SLC35F4A4IF30 521 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 TPP1O14773 563 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 AQP9O43315 295 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 AP1G1O43747 822 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 GRAP2O75791 330 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 ADCY5O95622 1261 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 CSF2P04141 144 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 CTSLP07711 333 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 C6P13671 934 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 ADRB3P13945 408 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 RRM1P23921 792 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 KRT9P35527 623 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 GMPRP36959 345 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 ETFBP38117 255 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 GEMIN4P57678 1058 aaKnown RBP9.3□□□□□ -0.92
CPSF4-211ENST00000471455 CLDN2P57739 230 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 SLC6A3Q01959 620 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 SLC20A2Q08357 652 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 PTK2BQ14289 1009 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 NR0B2Q15466 257 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 TAF5Q15542 800 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 ISXQ2M1V0 245 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 C3orf38Q5JPI3 329 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 TRIM65Q6PJ69 517 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 OLFML1Q6UWY5 402 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 FAM183BPQ6ZVS7 135 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 EFL1Q7Z2Z2 1120 aaKnown RBP9.3□□□□□ -0.92
CPSF4-211ENST00000471455 SLC22A18ASQ8N1D0 253 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 MSANTD4Q8NCY6 345 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 DENND6BQ8NEG7 585 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 ZNF397Q8NF99 534 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms