RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 BZW1Q7L1Q6 419 aaKnown RBP10.03□□□□□ -0.8
SF3A1-207ENST00000471342 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.03□□□□□ -0.8
SF3A1-207ENST00000471342 PIH1D2Q8WWB5 315 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 FAM3CQ92520 227 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 TTC28Q96AY4 2481 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 EXOC2Q96KP1 924 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 NUDCD1Q96RS6 583 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 VAT1Q99536 393 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 C2orf49Q9BVC5 232 aaPredicted RBP10.03□□□□□ -0.8
SF3A1-207ENST00000471342 FOXQ1Q9C009 403 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 CEP44Q9C0F1 390 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 SLC25A51Q9H1U9 297 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 TNKS2Q9H2K2 1166 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 ARNT2Q9HBZ2 717 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 NT5MQ9NPB1 228 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 DONSONQ9NYP3 566 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 UBA2Q9UBT2 640 aaPredicted RBP10.03□□□□□ -0.8
SF3A1-207ENST00000471342 RAB21Q9UL25 225 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 PPM1HQ9ULR3 514 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 FAM50BQ9Y247 325 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 SNX24Q9Y343 169 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 STON1Q9Y6Q2 735 aa10.03□□□□□ -0.8
SF3A1-207ENST00000471342 A0A0U1RQS6 177 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 EFCAB8A8MWE9 144 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 CHURC1-FNTBB4DL54 471 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 F5H423 210 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 DNALI1O14645 258 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 PI15O43692 258 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 OPHN1O60890 802 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 SIN3BO75182 1162 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 SEC31AO94979 1220 aaKnown RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 GSRP00390 522 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 ASLP04424 464 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 GM2AP17900 193 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 POLR2EP19388 210 aaKnown RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 CHRNA4P43681 627 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 MMP13P45452 471 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 CARSP49589 748 aaKnown RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 RENBPP51606 427 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 PFKPQ01813 784 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 GUCY2DQ02846 1103 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 PRKCQQ04759 706 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 NR1H3Q13133 447 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 SLC14A2Q15849 920 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 ERCC6LQ2NKX8 1250 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 MYLK3Q32MK0 819 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 CCDC181Q5TID7 509 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 HEATR6Q6AI08 1181 aaKnown RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 TIGD7Q6NT04 549 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 Q6ZVU0 165 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 SYDE1Q6ZW31 735 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 PID1Q7Z2X4 250 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 IGDCC3Q8IVU1 814 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 SUGP1Q8IWZ8 645 aaKnown RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 CCDC105Q8IYK2 499 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 TAB3Q8N5C8 712 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 ZNF557Q8N988 423 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 OR2AP1Q8NGE2 309 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 PRCCQ92733 491 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 ART4Q93070 314 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 RBM15Q96T37 977 aaKnown RBP eCLIP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 SEMA3CQ99985 751 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 EPB41L4BQ9H329 900 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 LTB4R2Q9NPC1 389 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 C11orf16Q9NQ32 467 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 ARHGEF3Q9NR81 526 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 CACNA2D2Q9NY47 1150 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 SEPT3Q9UH03 358 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 TRHDEQ9UKU6 1024 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 CA14Q9ULX7 337 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 PPIL1Q9Y3C6 166 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 V9GYY5 206 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-207ENST00000471342 USP34Q70CQ2 3546 aa10.02□□□□□ -0.81
SF3A1-207ENST00000471342 TBC1D3BA6NDS4 549 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.01□□□□□ -0.81
SF3A1-207ENST00000471342 E7ESA3 106 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 PIGNO95427 931 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 ECEL1O95672 775 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 AP2A1O95782 977 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 AGTP01019 485 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 FAM153BP0C7A2 387 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 TDGF1P13385 188 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 ITIH2P19823 946 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 DRD1P21728 446 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 DRD3P35462 400 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 VSNL1P62760 191 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 SULT2A1Q06520 285 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 GPS1Q13098 491 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 SPARCL1Q14515 664 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 FAM153CQ494X1 144 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 GLE1Q53GS7 698 aaKnown RBP10.01□□□□□ -0.81
SF3A1-207ENST00000471342 CARD16Q5EG05 197 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 TJAP1Q5JTD0 557 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 FNBP1LQ5T0N5 605 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 RETSATQ6NUM9 610 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 SRLQ86TD4 932 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 MAML2Q8IZL2 1156 aaPredicted RBP10.01□□□□□ -0.81
SF3A1-207ENST00000471342 PCDH20Q8N6Y1 951 aaKnown RBP10.01□□□□□ -0.81
SF3A1-207ENST00000471342 PDCD7Q8N8D1 485 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms