RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 L1CAMP32004 1257 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 PRCPP42785 496 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 CCL7P80098 99 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 MTA1Q13330 715 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 EIF4EBP2Q13542 120 aaPredicted RBP19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 ANKRD40Q6AI12 368 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 TMEM110Q86TL2 294 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 PTRH1Q86Y79 214 aaKnown RBP19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 SDR16C5Q8N3Y7 309 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 RYBPQ8N488 228 aaPredicted RBP19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 STK32AQ8WU08 396 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 CCDC74AQ96AQ1 378 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 SPATA32Q96LK8 384 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 KLF6Q99612 283 aaPredicted RBP19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 HEPHQ9BQS7 1158 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 SPON2Q9BUD6 331 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 LRRC61Q9BV99 259 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 CPEB1Q9BZB8 566 aaKnown RBP19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 WASF2Q9Y6W5 498 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 LRRK2Q5S007 2527 aa19.32■□□□□ 0.68
NCKIPSD-209ENST00000470006 A0A0D9SEW6 157 aa19.31■□□□□ 0.68
NCKIPSD-209ENST00000470006 TSHRP16473 764 aa19.31■□□□□ 0.68
NCKIPSD-209ENST00000470006 ALFQ53S48 1182 aa19.31■□□□□ 0.68
NCKIPSD-209ENST00000470006 ZSCAN30Q86W11 494 aa19.31■□□□□ 0.68
NCKIPSD-209ENST00000470006 ARHGEF19Q8IW93 802 aa19.31■□□□□ 0.68
NCKIPSD-209ENST00000470006 TMEM74Q96NL1 305 aa19.31■□□□□ 0.68
NCKIPSD-209ENST00000470006 C1QTNF2Q9BXJ5 285 aa19.31■□□□□ 0.68
NCKIPSD-209ENST00000470006 ZDHHC6Q9H6R6 413 aa19.31■□□□□ 0.68
NCKIPSD-209ENST00000470006 LOXL2Q9Y4K0 774 aa19.31■□□□□ 0.68
NCKIPSD-209ENST00000470006 UNC13CQ8NB66 2214 aa19.31■□□□□ 0.68
NCKIPSD-209ENST00000470006 D6RAR5 112 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 NVLO15381 856 aaKnown RBP19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 THAP12O43422 761 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 TSPAN6O43657 245 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 AP1G1O43747 822 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 CTSEP14091 401 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 PFN3P60673 137 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 PPARDQ03181 441 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 CCDC40Q4G0X9 1142 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 EFHC1Q5JVL4 640 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 RETSATQ6NUM9 610 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 PARS2Q7L3T8 475 aaKnown RBP19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 TFAP2DQ7Z6R9 452 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 VPS36Q86VN1 386 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 ZFAND4Q86XD8 727 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 ARL10Q8N8L6 244 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 DCAF4L2Q8NA75 395 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 KYQ8NBH2 561 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 CCDC34Q96HJ3 373 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 CLPBQ9H078 707 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 RABGEF1Q9UJ41 708 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 ACSL6Q9UKU0 697 aa19.3■□□□□ 0.68
NCKIPSD-209ENST00000470006 PRAMEF33A0A0G2JMD5 474 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 PRAMEF10O60809 474 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 HSF2BPO75031 334 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 ITIH1P19827 911 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 MAPK10P53779 464 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 PDCLQ13371 301 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 ELOCQ15369 112 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 CARD16Q5EG05 197 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 LRRC31Q6UY01 552 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 SETD3Q86TU7 594 aaPredicted RBP19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 Q8N9G6 341 aaPredicted RBP19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 DENND6BQ8NEG7 585 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 OR7D4Q8NG98 312 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 SLC2A13Q96QE2 648 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 GTPBP4Q9BZE4 634 aaKnown RBP19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 LRRN3Q9H3W5 708 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 RMND1Q9NWS8 449 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 GEMIN8Q9NWZ8 242 aaKnown RBP19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 ITM2BQ9Y287 266 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 BSNQ9UPA5 3926 aa19.29■□□□□ 0.68
NCKIPSD-209ENST00000470006 TRIM49BA6NDI0 452 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 GLI1P08151 1106 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 CELA2BP08218 269 aaPredicted RBP19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 OR1E1P30953 314 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 CCNHP51946 323 aaPredicted RBP19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 PMS1P54277 932 aaKnown RBP19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 GCNT1Q02742 428 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 PKP1Q13835 747 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 CLCA4Q14CN2 919 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 HID1Q8IV36 788 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 FSTL5Q8N475 847 aaPredicted RBP19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 PCDH20Q8N6Y1 951 aaKnown RBP19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 PCDH19Q8TAB3 1148 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 ZNF606Q8WXB4 792 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 USP7Q93009 1102 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 WDCPQ9H6R7 721 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 MPP6Q9NZW5 540 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 HECAQ9UBI9 543 aaPredicted RBP19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 GGT7Q9UJ14 662 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 PNMA8BQ9ULN7 279 aaPredicted RBP19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 GPR34Q9UPC5 381 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 SNX10Q9Y5X0 201 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 SCN8AQ9UQD0 1980 aa19.28■□□□□ 0.68
NCKIPSD-209ENST00000470006 C16orf96A6NNT2 1141 aa19.27■□□□□ 0.68
NCKIPSD-209ENST00000470006 ZNF202O95125 648 aa19.27■□□□□ 0.68
NCKIPSD-209ENST00000470006 ALPIP09923 528 aa19.27■□□□□ 0.68
NCKIPSD-209ENST00000470006 GNA15P30679 374 aa19.27■□□□□ 0.68
NCKIPSD-209ENST00000470006 EIF4A3P38919 411 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms