RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 PCID2Q5JVF3 399 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 ZNF783Q6ZMS7 281 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 MARK2Q7KZI7 788 aaKnown RBP18.38■□□□□ 0.53
SMC4-211ENST00000469858 MFN1Q8IWA4 741 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 CPXM2Q8N436 756 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 CENPTQ96BT3 561 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 ZNF778Q96MU6 729 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 KLF6Q99612 283 aaPredicted RBP18.38■□□□□ 0.53
SMC4-211ENST00000469858 TASP1Q9H6P5 420 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 HAUS2Q9NVX0 235 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 NKIRAS1Q9NYS0 192 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 PLK2Q9NYY3 685 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 ZFATQ9P243 1243 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 VPS28Q9UK41 221 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 CCDC195A0A1B0GUA6 201 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 FAM47DPA6NHR8 397 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 TRIM49D1C9J1S8 452 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 SNAP91O60641 907 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 KRT37O76014 449 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 MT-ND3P03897 115 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 CSKP41240 450 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 SEC24CP53992 1094 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 ARF5P84085 180 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 BMPR2Q13873 1038 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 LGSNQ5TDP6 509 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 LEMD2Q8NC56 503 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 PPHLN1Q8NEY8 458 aaKnown RBP18.37■□□□□ 0.53
SMC4-211ENST00000469858 DYDC1Q8WWB3 177 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 EXOC2Q96KP1 924 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 PSKH2Q96QS6 385 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 MGME1Q9BQP7 344 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 KIFC1Q9BW19 673 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 PRKD2Q9BZL6 878 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 ZDHHC7Q9NXF8 308 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 SNRPAP09012 282 aaKnown RBP18.37■□□□□ 0.53
SMC4-211ENST00000469858 RFTN1Q14699 578 aaPredicted RBP18.37■□□□□ 0.53
SMC4-211ENST00000469858 MPPE1Q53F39 396 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 POTEHQ6S545 545 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 LINGO4Q6UY18 593 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 TAX1BP1Q86VP1 789 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 RIN3Q8TB24 985 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 USP13Q92995 863 aaPredicted RBP18.37■□□□□ 0.53
SMC4-211ENST00000469858 TADA1Q96BN2 335 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 SERAC1Q96JX3 654 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 FEM1AQ9BSK4 669 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 PBX4Q9BYU1 374 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 EPN3Q9H201 632 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 DPP7Q9UHL4 492 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 SMG5Q9UPR3 1016 aaKnown RBP18.37■□□□□ 0.53
SMC4-211ENST00000469858 MYOFQ9NZM1 2061 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 LAMA3Q16787 3333 aa18.37■□□□□ 0.53
SMC4-211ENST00000469858 CEP290O15078 2479 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 ANKRD36A6QL64 1941 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 PRPF4O43172 522 aaKnown RBP eCLIP18.36■□□□□ 0.53
SMC4-211ENST00000469858 KRT38O76015 456 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 CA4P22748 312 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 SEPT6Q14141 434 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 PRSS36Q5K4E3 855 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 ALG1LQ6GMV1 187 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 PKN3Q6P5Z2 889 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 CCDC117Q8IWD4 279 aaPredicted RBP18.36■□□□□ 0.53
SMC4-211ENST00000469858 ING5Q8WYH8 240 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 NKX2-4Q9H2Z4 354 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 ARNT2Q9HBZ2 717 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 TDP1Q9NUW8 608 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 PSAT1Q9Y617 370 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 CDH23Q9H251 3354 aa18.36■□□□□ 0.53
SMC4-211ENST00000469858 RANBP2P49792 3224 aaKnown RBP18.36■□□□□ 0.53
SMC4-211ENST00000469858 E2F8A0AVK6 867 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 SERPINF2P08697 491 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 RGRP47804 291 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 SERPINB9P50453 376 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 NAB1Q13506 487 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 CYTH1Q15438 398 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 SLC1A5Q15758 541 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 PACS1Q6VY07 963 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 RNF135Q8IUD6 432 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 GDAP1Q8TB36 358 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 BCAS4Q8TDM0 211 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 GDPD5Q8WTR4 605 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 ZNF707Q96C28 371 aaPredicted RBP18.35■□□□□ 0.53
SMC4-211ENST00000469858 IFT43Q96FT9 208 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 TLE6Q9H808 572 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 C20orf96Q9NUD7 363 aaPredicted RBP18.35■□□□□ 0.53
SMC4-211ENST00000469858 TCAF1Q9Y4C2 921 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 ERICH4A6NGS2 130 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 TYROBPO43914 113 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 ZMPSTE24O75844 475 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 PRAMEF12O95522 483 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 RPA3P35244 121 aaPredicted RBP18.35■□□□□ 0.53
SMC4-211ENST00000469858 SERPINH1P50454 418 aaKnown RBP18.35■□□□□ 0.53
SMC4-211ENST00000469858 SCNN1BP51168 640 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 HSP90AA5PQ58FG0 334 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 MROH9Q5TGP6 573 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 PPP2R2DQ66LE6 453 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 ZNF449Q6P9G9 518 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 ELMSAN1Q6PJG2 1045 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 KCNMB4Q86W47 210 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 PIDD1Q9HB75 910 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 TXNDC16Q9P2K2 825 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms