RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 CYP4V2Q6ZWL3 525 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-204ENST00000469443 PARS2Q7L3T8 475 aaKnown RBP18.58■□□□□ 0.56
PHGDH-204ENST00000469443 GLRX5Q86SX6 157 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 IQCHQ86VS3 1027 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 HORMAD1Q86X24 394 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 PSTKQ8IV42 348 aaKnown RBP18.58■□□□□ 0.56
PHGDH-204ENST00000469443 OR6K2Q8NGY2 324 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 BAHD1Q8TBE0 780 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-204ENST00000469443 KCTD15Q96SI1 283 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-204ENST00000469443 GDF3Q9NR23 364 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.58■□□□□ 0.56
PHGDH-204ENST00000469443 SHROOM3Q8TF72 1996 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 COL5A1P20908 1838 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-204ENST00000469443 ARID1BQ8NFD5 2236 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-204ENST00000469443 KRIT1O00522 736 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 PCDH8O95206 1070 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 TRIM16O95361 564 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 POP4O95707 220 aaKnown RBP18.57■□□□□ 0.56
PHGDH-204ENST00000469443 TOP3BO95985 862 aaKnown RBP18.57■□□□□ 0.56
PHGDH-204ENST00000469443 ADRB3P13945 408 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 CASP14P31944 242 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 PCK1P35558 622 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 ZNF135P52742 658 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-204ENST00000469443 NDST2P52849 883 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 NXPH1P58417 271 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 OVGP1Q12889 678 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 STAT4Q14765 748 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 ZNF284Q2VY69 593 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 MYLK3Q32MK0 819 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 FBXL19Q6PCT2 694 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 RHBDD1Q8TEB9 315 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 GDAP1L1Q96MZ0 367 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 CDC6Q99741 560 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 OSBPL1AQ9BXW6 950 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 LRRC19Q9H756 370 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 ZFR2Q9UPR6 939 aaKnown RBP18.57■□□□□ 0.56
PHGDH-204ENST00000469443 BTBD3Q9Y2F9 522 aa18.57■□□□□ 0.56
PHGDH-204ENST00000469443 A0A087X0T9 212 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 SLC31A1O15431 190 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 YKT6O15498 198 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 DAPK3O43293 454 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 AP1G1O43747 822 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 MAGEC1O60732 1142 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 IGSF6O95976 241 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 FAM228BP0C875 321 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 GKP32189 559 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 GRK6P43250 576 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 RHOAP61586 193 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 IL9RQ01113 521 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 NFKBIBQ15653 356 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 ZNF805Q5CZA5 627 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 PPP6R3Q5H9R7 873 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-204ENST00000469443 PRAMEF14Q5SWL7 426 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 ATXN7L2Q5T6C5 722 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-204ENST00000469443 OXR1Q8N573 874 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 KLK6Q92876 244 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 VOPP1Q96AW1 172 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 SCNM1Q9BWG6 230 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 THAP2Q9H0W7 228 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 TSPY26PQ9H489 355 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 ERVMER34-1Q9H9K5 563 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 FADS3Q9Y5Q0 445 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 EPG5Q9HCE0 2579 aa18.56■□□□□ 0.56
PHGDH-204ENST00000469443 ARHGAP42A6NI28 874 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 C16orf96A6NNT2 1141 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 CBFA2T2O43439 604 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 HYAL3O43820 417 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-204ENST00000469443 UGT2B4P06133 528 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 FTH1P19P0C7X4 201 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 PRLRP16471 622 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 ERCC2P18074 760 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 SPINK2P20155 84 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 RAD51Q06609 339 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 PIGHQ14442 188 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-204ENST00000469443 INAVAQ3KP66 663 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 TMEM259Q4ZIN3 620 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 KIAA1161Q6NSJ0 714 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 ALKBH5Q6P6C2 394 aaKnown RBP18.55■□□□□ 0.56
PHGDH-204ENST00000469443 RFX8Q6ZV50 586 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 SPATS2Q86XZ4 545 aaKnown RBP18.55■□□□□ 0.56
PHGDH-204ENST00000469443 TMEM145Q8NBT3 493 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 RAB7BQ96AH8 199 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 CELF6Q96J87 481 aaKnown RBP18.55■□□□□ 0.56
PHGDH-204ENST00000469443 FEM1CQ96JP0 617 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 PDFQ9HBH1 243 aa18.55■□□□□ 0.56
PHGDH-204ENST00000469443 UBA2Q9UBT2 640 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-204ENST00000469443 APOBEC2Q9Y235 224 aaKnown RBP18.55■□□□□ 0.56
PHGDH-204ENST00000469443 PRAMEF11O60813 436 aa18.54■□□□□ 0.56
PHGDH-204ENST00000469443 HNRNPA2B1P22626 353 aaKnown RBP18.54■□□□□ 0.56
PHGDH-204ENST00000469443 AKT2P31751 481 aa18.54■□□□□ 0.56
PHGDH-204ENST00000469443 HNRNPH3P31942 346 aaKnown RBP18.54■□□□□ 0.56
PHGDH-204ENST00000469443 HCAR3P49019 387 aa18.54■□□□□ 0.56
PHGDH-204ENST00000469443 ARRB1P49407 418 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-204ENST00000469443 RPS21P63220 83 aaKnown RBP18.54■□□□□ 0.56
PHGDH-204ENST00000469443 TRIM14Q14142 442 aa18.54■□□□□ 0.56
PHGDH-204ENST00000469443 SHBQ15464 509 aa18.54■□□□□ 0.56
PHGDH-204ENST00000469443 CCDC122Q5T0U0 273 aa18.54■□□□□ 0.56
PHGDH-204ENST00000469443 SEL1L3Q68CR1 1132 aa18.54■□□□□ 0.56
PHGDH-204ENST00000469443 SPECC1LQ69YQ0 1117 aa18.54■□□□□ 0.56
PHGDH-204ENST00000469443 GDPD4Q6W3E5 623 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms