RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 SYT11Q9BT88 431 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 SELENOOQ9BVL4 669 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 NUP85Q9BW27 656 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 BTBD2Q9BX70 525 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 IRF2BPLQ9H1B7 796 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 ISCUQ9H1K1 167 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 LHX5Q9H2C1 402 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 FAM124BQ9H5Z6 455 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 SLC28A3Q9HAS3 691 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 SPATA6Q9NWH7 488 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 USP36Q9P275 1121 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 MTRRQ9UBK8 725 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 CROTQ9UKG9 612 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 MAGED2Q9UNF1 606 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 SSX2IPQ9Y2D8 614 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 HYOU1Q9Y4L1 999 aa4.26□□□□□ -1.73
TMEM39A-204ENST00000468545 SYNJ2BP-COX16A0A087WUM0 186 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 WDR27A2RRH5 827 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 MTMR11A4FU01 709 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 PRRG1O14668 218 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 XPO1O14980 1071 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 TEX28O15482 410 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 PJA2O43164 708 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 NCK2O43639 380 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 TBC1D4O60343 1298 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 PALMO75781 387 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 SEC24AO95486 1093 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 LSM8O95777 96 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 IL18BPO95998 194 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 KNG1P01042 644 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 CYP1A2P05177 515 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 RB1P06400 928 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 CNPP09543 421 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 LINC00271P0C7V0 271 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 SETSIPP0DME0 302 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 MYBL1P10243 752 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 CTSAP10619 480 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 HAPLN1P10915 354 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 KRT3P12035 628 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 ZNF28P17035 718 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 MMP8P22894 467 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 CASQ1P31415 396 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 CDH5P33151 784 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 GJC1P36383 396 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 ACADSBP45954 432 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 ALDH1A3P47895 512 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 TUFMP49411 452 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 BCAT1P54687 386 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 ERVK-21P61565 698 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 TMPRSS15P98073 1019 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 SLC6A3Q01959 620 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 ROM1Q03395 351 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 ADIGQ0VDE8 80 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 PTP4A2Q12974 167 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 PDCLQ13371 301 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 MAMLD1Q13495 774 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 ZNF268Q14587 947 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 TAF5Q15542 800 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 RAB30Q15771 203 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 ZFYVE27Q5T4F4 411 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 PHF19Q5T6S3 580 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 FAM102AQ5T9C2 384 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 BROXQ5VW32 411 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 PPP1R2P3Q6NXS1 205 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 SYT10Q6XYQ8 523 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 SPOCD1Q6ZMY3 1216 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 CLEC20AQ6ZU45 233 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 MON1BQ7L1V2 547 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 CXXC5Q7LFL8 322 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 GPRIN1Q7Z2K8 1008 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 XYLT1Q86Y38 959 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 PHF13Q86YI8 300 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 LRRC56Q8IYG6 542 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 NUP93Q8N1F7 819 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 SLC35F6Q8N357 371 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 TTC9BQ8N6N2 239 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 EMC1Q8N766 993 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 STPG3Q8N7X2 389 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 LINC01356Q8N9X3 169 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 ZMIZ2Q8NF64 920 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 JOSD2Q8TAC2 188 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 SCAMP5Q8TAC9 235 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 FEZF2Q8TBJ5 459 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 ZNF564Q8TBZ8 553 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 SPPL2BQ8TCT7 592 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 GDPD5Q8WTR4 605 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 CLEC4CQ8WTT0 213 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 SLC35F5Q8WV83 523 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 FAM149B1Q96BN6 582 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 TIFAQ96CG3 184 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 SMARCD1Q96GM5 515 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 HSFY1Q96LI6 401 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 SAMD11Q96NU1 681 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 MCEEQ96PE7 176 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 PKMYT1Q99640 499 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 ULBP1Q9BZM6 244 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 TSGA10Q9BZW7 698 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 TRIM7Q9C029 511 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 ZBP1Q9H171 429 aa4.25□□□□□ -1.73
TMEM39A-204ENST00000468545 OR10A5Q9H207 317 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms