RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 C10orf88Q9H8K7 445 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 POLMQ9NP87 494 aaPredicted RBP15.43■□□□□ 0.06
SNIP1-202ENST00000468040 HECAQ9UBI9 543 aaPredicted RBP15.43■□□□□ 0.06
SNIP1-202ENST00000468040 ATP8A1Q9Y2Q0 1164 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 MRFAP1Q9Y605 127 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 TTC28Q96AY4 2481 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 MYO18AQ92614 2054 aaKnown RBP15.42■□□□□ 0.06
SNIP1-202ENST00000468040 C5orf60A6NFR6 353 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 MUSKO15146 869 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 RNASEH1O60930 286 aaKnown RBP15.42■□□□□ 0.06
SNIP1-202ENST00000468040 POP4O95707 220 aaKnown RBP15.42■□□□□ 0.06
SNIP1-202ENST00000468040 ACTN2P35609 894 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 COILP38432 576 aaPredicted RBP15.42■□□□□ 0.06
SNIP1-202ENST00000468040 CXCL12P48061 93 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 MAXP61244 160 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 GRM3Q14832 879 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 MYLK3Q32MK0 819 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 P3H1Q32P28 736 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 ATXN7L2Q5T6C5 722 aaPredicted RBP15.42■□□□□ 0.06
SNIP1-202ENST00000468040 ITPRIPL1Q6GPH6 555 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 KIAA1211LQ6NV74 962 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 CCDC137Q6PK04 289 aaKnown RBP15.42■□□□□ 0.06
SNIP1-202ENST00000468040 TMEM92Q6UXU6 159 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 GSTA5Q7RTV2 222 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 PID1Q7Z2X4 250 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 ZNF572Q7Z3I7 529 aaPredicted RBP15.42■□□□□ 0.06
SNIP1-202ENST00000468040 ZNF567Q8N184 647 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 STK40Q8N2I9 435 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 CNTD1Q8N815 330 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 CCDC89Q8N998 374 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 ATL2Q8NHH9 583 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 GRK7Q8WTQ7 553 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 TUBGCP5Q96RT8 1024 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 HEPHQ9BQS7 1158 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 CEP41Q9BYV8 373 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 RSPH9Q9H1X1 276 aaPredicted RBP15.42■□□□□ 0.06
SNIP1-202ENST00000468040 SCUBE2Q9NQ36 999 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 SPATA6Q9NWH7 488 aaPredicted RBP15.42■□□□□ 0.06
SNIP1-202ENST00000468040 IL36AQ9UHA7 158 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 CKAP5Q14008 2032 aa15.42■□□□□ 0.06
SNIP1-202ENST00000468040 ATG2BQ96BY7 2078 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 TCRBV21S2A2A0A5A6 115 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 C1QTNF3-AMACRE9PGA6 284 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 GCATO75600 419 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 ALDH1A2O94788 518 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 PAPSS2O95340 614 aaPredicted RBP15.41■□□□□ 0.06
SNIP1-202ENST00000468040 PRNPP04156 253 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 CR2P20023 1033 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 COL9A1P20849 921 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 RGRP47804 291 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 KCNJ1P48048 391 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 SCNN1BP51168 640 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 GDF10P55107 478 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 ANKRD20A2Q5SQ80 823 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 ANKRD20A1Q5TYW2 823 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 ANKRD20A3Q5VUR7 823 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 TTC27Q6P3X3 843 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 ARHGEF18Q6ZSZ5 1173 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 SRLQ86TD4 932 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 TMEM105Q8N8V8 129 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 MNS1Q8NEH6 495 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 SPATA4Q8NEY3 305 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 TSTD1Q8NFU3 115 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 OR6K2Q8NGY2 324 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 PPP1R2P1Q96PQ5 205 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 SEMA3CQ99985 751 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 OSBPL1AQ9BXW6 950 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 CPEB1Q9BZB8 566 aaKnown RBP15.41■□□□□ 0.06
SNIP1-202ENST00000468040 ZDHHC6Q9H6R6 413 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 GLOD4Q9HC38 313 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 CD248Q9HCU0 757 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 RSPH14Q9UHP6 348 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 EVLQ9UI08 416 aaPredicted RBP15.41■□□□□ 0.06
SNIP1-202ENST00000468040 TRIOO75962 3097 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 BDP1A6H8Y1 2624 aa15.41■□□□□ 0.06
SNIP1-202ENST00000468040 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.4■□□□□ 0.06
SNIP1-202ENST00000468040 PRR33A8MZF0 331 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 INSIG1O15503 277 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 APBB3O95704 486 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 GAS8O95995 478 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 IFNB1P01574 187 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 C7P10643 843 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 COPAP53621 1224 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 DSC2Q02487 901 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 ZBTB16Q05516 673 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 FAM46CQ5VWP2 391 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 ZNF776Q68DI1 518 aaPredicted RBP15.4■□□□□ 0.06
SNIP1-202ENST00000468040 C4orf22Q6V702 233 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 TMPRSS6Q8IU80 811 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 CAMKK1Q8N5S9 505 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 CHST14Q8NCH0 376 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 TMIEQ8NEW7 156 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 CCDC110Q8TBZ0 833 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 IMP4Q96G21 291 aaKnown RBP15.4■□□□□ 0.06
SNIP1-202ENST00000468040 FAM129BQ96TA1 746 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 DDX47Q9H0S4 455 aaKnown RBP15.4■□□□□ 0.06
SNIP1-202ENST00000468040 SLC25A51Q9H1U9 297 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 GBA3Q9H227 469 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 ATP13A3Q9H7F0 1226 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 NOD2Q9HC29 1040 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms