RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 ZNF571Q7Z3V5 609 aaPredicted RBP19.41■□□□□ 0.7
COL7A1-207ENST00000467985 UMODL1-AS1Q8N2C9 162 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 RYBPQ8N488 228 aaPredicted RBP19.41■□□□□ 0.7
COL7A1-207ENST00000467985 TMEM145Q8NBT3 493 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 OR2AP1Q8NGE2 309 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 FAM174AQ8TBP5 190 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 RAB7BQ96AH8 199 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 KLHDC7BQ96G42 594 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 FEM1CQ96JP0 617 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 OSBPL1AQ9BXW6 950 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 TM6SF2Q9BZW4 377 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 SCINQ9Y6U3 715 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 COL5A1P20908 1838 aaPredicted RBP19.4■□□□□ 0.7
COL7A1-207ENST00000467985 SLC31A1O15431 190 aa19.4■□□□□ 0.7
COL7A1-207ENST00000467985 BUB1O43683 1085 aa19.4■□□□□ 0.7
COL7A1-207ENST00000467985 FTLP02792 175 aaPredicted RBP19.4■□□□□ 0.7
COL7A1-207ENST00000467985 HNRNPA2B1P22626 353 aaKnown RBP19.4■□□□□ 0.7
COL7A1-207ENST00000467985 EPHA8P29322 1005 aaPredicted RBP19.4■□□□□ 0.7
COL7A1-207ENST00000467985 RAD51Q06609 339 aa19.4■□□□□ 0.7
COL7A1-207ENST00000467985 SHBQ15464 509 aa19.4■□□□□ 0.7
COL7A1-207ENST00000467985 TMEM259Q4ZIN3 620 aa19.4■□□□□ 0.7
COL7A1-207ENST00000467985 INO80DQ53TQ3 878 aaPredicted RBP19.4■□□□□ 0.7
COL7A1-207ENST00000467985 SPATS2Q86XZ4 545 aaKnown RBP19.4■□□□□ 0.7
COL7A1-207ENST00000467985 FNIP1Q8TF40 1166 aa19.4■□□□□ 0.7
COL7A1-207ENST00000467985 NCAPGQ9BPX3 1015 aa19.4■□□□□ 0.7
COL7A1-207ENST00000467985 NOL6Q9H6R4 1146 aaKnown RBP19.4■□□□□ 0.7
COL7A1-207ENST00000467985 TOR4AQ9NXH8 423 aa19.4■□□□□ 0.7
COL7A1-207ENST00000467985 BZW2Q9Y6E2 419 aaKnown RBP19.4■□□□□ 0.7
COL7A1-207ENST00000467985 TMEM191CA6NGB0 347 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 GOLGA6L19H0YKK7 550 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 RNF103O00237 685 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 KRIT1O00522 736 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 RNF8O76064 485 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 MYBL1P10243 752 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 PRLRP16471 622 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 TPI1P60174 286 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 OGDHQ02218 1023 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 SERINC3Q13530 473 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 MYLK3Q32MK0 819 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 ZNF805Q5CZA5 627 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 GATAD2AQ86YP4 633 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 ARHGEF26Q96DR7 871 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 IQCDQ96DY2 449 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 GDAP1L1Q96MZ0 367 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 CBX8Q9HC52 389 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 MRPL47Q9HD33 250 aaKnown RBP19.39■□□□□ 0.69
COL7A1-207ENST00000467985 AP4E1Q9UPM8 1137 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 ZFR2Q9UPR6 939 aaKnown RBP19.39■□□□□ 0.69
COL7A1-207ENST00000467985 FADS3Q9Y5Q0 445 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 ACTL7AQ9Y615 435 aa19.39■□□□□ 0.69
COL7A1-207ENST00000467985 A0A1W2PQJ5 194 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 C16orf96A6NNT2 1141 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 RASA4BC9J798 803 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 DDX3XO00571 662 aaKnown RBP eCLIP19.38■□□□□ 0.69
COL7A1-207ENST00000467985 ATMINO43313 823 aaPredicted RBP19.38■□□□□ 0.69
COL7A1-207ENST00000467985 RASA4O43374 803 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 TSPAN6O43657 245 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 TMCC1O94876 653 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 IGSF6O95976 241 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 THEGLP0DJG4 465 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 CDK4P11802 303 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 NDST2P52849 883 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 FANCCQ00597 558 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 ERMARDQ5T6L9 678 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 E4F1Q66K89 784 aaPredicted RBP19.38■□□□□ 0.69
COL7A1-207ENST00000467985 LEKR1Q6ZMV7 388 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 PARS2Q7L3T8 475 aaKnown RBP19.38■□□□□ 0.69
COL7A1-207ENST00000467985 ZFHX4Q86UP3 3567 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 DCP2Q8IU60 420 aaKnown RBP19.38■□□□□ 0.69
COL7A1-207ENST00000467985 PSTKQ8IV42 348 aaKnown RBP19.38■□□□□ 0.69
COL7A1-207ENST00000467985 GALNT15Q8N3T1 639 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 SYN2Q92777 582 aaPredicted RBP19.38■□□□□ 0.69
COL7A1-207ENST00000467985 KLK6Q92876 244 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 HMCESQ96FZ2 354 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 SLC17A9Q9BYT1 436 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 DOCK9Q9BZ29 2069 aa19.38■□□□□ 0.69
COL7A1-207ENST00000467985 CNOT8Q9UFF9 292 aaKnown RBP19.38■□□□□ 0.69
COL7A1-207ENST00000467985 ITPR1Q14643 2758 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 GOLGA8CPA6NN73 597 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 PRPSAP2O60256 369 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 LDOC1O95751 146 aaPredicted RBP19.37■□□□□ 0.69
COL7A1-207ENST00000467985 ZNF135P52742 658 aaPredicted RBP19.37■□□□□ 0.69
COL7A1-207ENST00000467985 RHOAP61586 193 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 SEL1L3Q68CR1 1132 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 GDPD4Q6W3E5 623 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 CCNI2Q6ZMN8 369 aaPredicted RBP19.37■□□□□ 0.69
COL7A1-207ENST00000467985 TMPRSS7Q7RTY8 843 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 LUZP1Q86V48 1076 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 VPS36Q86VN1 386 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 OR6K2Q8NGY2 324 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 ZNF653Q96CK0 615 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 ZMIZ1Q9ULJ6 1067 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 MFHAS1Q9Y4C4 1052 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 PCDHGA1Q9Y5H4 931 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 HS3ST3A1Q9Y663 406 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 PKD1L2Q7Z442 2459 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 TRPM6Q9BX84 2022 aa19.37■□□□□ 0.69
COL7A1-207ENST00000467985 A6NNZ2 444 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 EEF2KO00418 725 aaKnown RBP19.36■□□□□ 0.69
COL7A1-207ENST00000467985 NEMP1O14524 444 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms