RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 BHLHA9Q7RTU4 235 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 GDF7Q7Z4P5 450 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 TMC8Q8IU68 726 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 SYT12Q8IV01 421 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 ARID3BQ8IVW6 561 aaPredicted RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 HDDC3Q8N4P3 179 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 LSM14AQ8ND56 463 aaKnown RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 TTC8Q8TAM2 541 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 CCDC12Q8WUD4 166 aaPredicted RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 ADAMTS14Q8WXS8 1223 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 PIGKQ92643 395 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 CAVIN3Q969G5 261 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 GJA10Q969M2 543 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 CCDC136Q96JN2 1154 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 CEP170P1Q96L14 293 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 UROC1Q96N76 676 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 LRRC3BQ96PB8 259 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 NDC1Q9BTX1 674 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 NFKBIZQ9BYH8 718 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 C6orf50Q9HD87 102 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 SYBUQ9NX95 663 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 ING3Q9NXR8 418 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 TPCN1Q9ULQ1 816 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 MAFFQ9ULX9 164 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 CLCA2Q9UQC9 943 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 YIPF1Q9Y548 306 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 ANAPC1Q9H1A4 1944 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 TP53BP1Q12888 1972 aaPredicted RBP4.47□□□□□ -1.69
SSR3-204ENST00000467733 DOPEY1Q5JWR5 2465 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 COL5A1P20908 1838 aaPredicted RBP4.47□□□□□ -1.69
SSR3-204ENST00000467733 A0A1B0GUA9 196 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 DIRC3C9JPN6 131 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 H7C4K7 107 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 I3L4J1 428 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 SYN3O14994 580 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 TBX3O15119 743 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 EDIL3O43854 480 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 PRAMEF4O60810 478 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 DKC1O60832 514 aaKnown RBP eCLIP4.47□□□□□ -1.69
SSR3-204ENST00000467733 B3GAT3O94766 335 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 PRAMEF12O95522 483 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 EGFP01133 1207 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 HKR1P10072 659 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 DRD1P21728 446 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 GNA11P29992 359 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 ABCG1P45844 678 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 QARSP47897 775 aaKnown RBP4.47□□□□□ -1.69
SSR3-204ENST00000467733 DGKEP52429 567 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 ATXN3P54252 364 aaPredicted RBP4.47□□□□□ -1.69
SSR3-204ENST00000467733 PLD1Q13393 1074 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 MAPK6Q16659 721 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 PFKFB3Q16875 520 aaPredicted RBP4.47□□□□□ -1.69
SSR3-204ENST00000467733 Q4G0T1 1027 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 ZNF362Q5T0B9 420 aaPredicted RBP4.47□□□□□ -1.69
SSR3-204ENST00000467733 STXBP5Q5T5C0 1151 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 CD300LGQ6UXG3 332 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 CDR2LQ86X02 465 aaPredicted RBP4.47□□□□□ -1.69
SSR3-204ENST00000467733 PLXDC1Q8IUK5 500 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 LYSMD2Q8IV50 215 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 ZNF843Q8N446 348 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 PIK3C3Q8NEB9 887 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 TSTD1Q8NFU3 115 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 OR5M3Q8NGP4 307 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 RPLP0P6Q8NHW5 317 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 ETNPPLQ8TBG4 499 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 BICD2Q8TD16 824 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 BPIFB1Q8TDL5 484 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 COG1Q8WTW3 980 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 RUFY2Q8WXA3 655 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 LINC00476Q8WZB0 136 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 CNOT6LQ96LI5 555 aaKnown RBP4.47□□□□□ -1.69
SSR3-204ENST00000467733 PPP1R10Q96QC0 940 aaKnown RBP4.47□□□□□ -1.69
SSR3-204ENST00000467733 TPSD1Q9BZJ3 242 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 ENKD1Q9H0I2 346 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 QRSL1Q9H0R6 528 aaKnown RBP4.47□□□□□ -1.69
SSR3-204ENST00000467733 PRDM13Q9H4Q3 707 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 AKIP1Q9NQ31 210 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 XPNPEP1Q9NQW7 623 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 DNAJC28Q9NX36 388 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 TRPM5Q9NZQ8 1165 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 AFF4Q9UHB7 1163 aaKnown RBP4.47□□□□□ -1.69
SSR3-204ENST00000467733 FBXL5Q9UKA1 691 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 MYOFQ9NZM1 2061 aa4.47□□□□□ -1.69
SSR3-204ENST00000467733 USP9YO00507 2555 aaPredicted RBP4.47□□□□□ -1.69
SSR3-204ENST00000467733 ATXN2Q99700 1313 aaKnown RBP4.46□□□□□ -1.69
SSR3-204ENST00000467733 TCHHQ07283 1943 aa4.46□□□□□ -1.69
SSR3-204ENST00000467733 MYLKQ15746 1914 aa4.46□□□□□ -1.69
SSR3-204ENST00000467733 CREBBPQ92793 2442 aa4.46□□□□□ -1.69
SSR3-204ENST00000467733 ABCA12Q86UK0 2595 aa4.46□□□□□ -1.7
SSR3-204ENST00000467733 CYP3A7-CYP3A51PA0A087WV96 503 aa4.46□□□□□ -1.7
SSR3-204ENST00000467733 CAPN8A6NHC0 703 aa4.46□□□□□ -1.7
SSR3-204ENST00000467733 ALG1L2C9J202 215 aa4.46□□□□□ -1.7
SSR3-204ENST00000467733 ZBTB43O43298 467 aa4.46□□□□□ -1.7
SSR3-204ENST00000467733 PHF2O75151 1096 aa4.46□□□□□ -1.7
SSR3-204ENST00000467733 FGF19O95750 216 aa4.46□□□□□ -1.7
SSR3-204ENST00000467733 CFIP05156 583 aa4.46□□□□□ -1.7
SSR3-204ENST00000467733 CD59P13987 128 aa4.46□□□□□ -1.7
SSR3-204ENST00000467733 CDK11BP21127 795 aaKnown RBP4.46□□□□□ -1.7
SSR3-204ENST00000467733 CYP3A7P24462 503 aa4.46□□□□□ -1.7
SSR3-204ENST00000467733 APOBEC3AP31941 199 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms