RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 GRAP2O75791 330 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 TNFSF15O95150 251 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 ERBB2P04626 1255 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 ITGB2P05107 769 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 RHOCP08134 193 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 JUNDP17535 347 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 GNA15P30679 374 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 NOS2P35228 1153 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 ABL2P42684 1182 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 SERPINH1P50454 418 aaKnown RBP12.42□□□□□ -0.42
UBR4-211ENST00000467272 ARF5P84085 180 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 SLC20A2Q08357 652 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 PDE1CQ14123 709 aaPredicted RBP12.42□□□□□ -0.42
UBR4-211ENST00000467272 BRMS1LQ5PSV4 323 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 C11orf57Q6ZUT1 292 aaPredicted RBP12.42□□□□□ -0.42
UBR4-211ENST00000467272 ENOSF1Q7L5Y1 443 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 HSCBQ8IWL3 235 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 ELOA2Q8IYF1 753 aaPredicted RBP12.42□□□□□ -0.42
UBR4-211ENST00000467272 RBFAQ8N0V3 343 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 ARL14Q8N4G2 192 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 PCDH20Q8N6Y1 951 aaKnown RBP12.42□□□□□ -0.42
UBR4-211ENST00000467272 SHC3Q92529 594 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 PPP1R16AQ96I34 528 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 SEMA3CQ99985 751 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 LRRC61Q9BV99 259 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 UBE2TQ9NPD8 197 aaPredicted RBP12.42□□□□□ -0.42
UBR4-211ENST00000467272 GGT7Q9UJ14 662 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 RABGEF1Q9UJ41 708 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 SNX10Q9Y5X0 201 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 SYNJ2BP-COX16A0A087WUM0 186 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 M0QYT0 321 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 FPGTO14772 594 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 PSMA7O14818 248 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 MUSKO15146 869 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 YY2O15391 372 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 THAP12O43422 761 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 SUV39H1O43463 412 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 KRT5P13647 590 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 SLC6A3Q01959 620 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 NME3Q13232 169 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 PTPN20Q4JDL3 420 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 CARD16Q5EG05 197 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 ACBD5Q5T8D3 534 aaPredicted RBP12.41□□□□□ -0.42
UBR4-211ENST00000467272 TRIM65Q6PJ69 517 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 B3GNT8Q7Z7M8 397 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 OR7D4Q8NG98 312 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 LMX1AQ8TE12 382 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 BTN2A2Q8WVV5 523 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 NAT6Q93015 286 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 RNF34Q969K3 372 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 RAB7BQ96AH8 199 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 ISG20Q96AZ6 181 aaKnown RBP12.41□□□□□ -0.42
UBR4-211ENST00000467272 TIGD1Q96MW7 591 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 CCDC3Q9BQI4 270 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 HEPHQ9BQS7 1158 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 TKTL2Q9H0I9 626 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 SIK2Q9H0K1 926 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 DYRK4Q9NR20 520 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 TMPRSS4Q9NRS4 437 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 RRN3Q9NYV6 651 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 MPP6Q9NZW5 540 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 COX16Q9P0S2 106 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 SPASTQ9UBP0 616 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 KIF26BQ2KJY2 2108 aa12.41□□□□□ -0.42
UBR4-211ENST00000467272 TRPM6Q9BX84 2022 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 A0A1W2PQM1 296 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 PLD2O14939 933 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 SMC2O95347 1197 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 AFPP02771 609 aaKnown RBP12.4□□□□□ -0.42
UBR4-211ENST00000467272 CENPBP07199 599 aaPredicted RBP12.4□□□□□ -0.42
UBR4-211ENST00000467272 SLC5A2P31639 672 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 UGT1A5P35504 534 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 IGFALSP35858 605 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 CCNHP51946 323 aaPredicted RBP12.4□□□□□ -0.42
UBR4-211ENST00000467272 ADKP55263 362 aaKnown RBP12.4□□□□□ -0.42
UBR4-211ENST00000467272 YPEL5P62699 121 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 APBA1Q02410 837 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 EIF3IQ13347 325 aaKnown RBP12.4□□□□□ -0.42
UBR4-211ENST00000467272 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
UBR4-211ENST00000467272 CCDC40Q4G0X9 1142 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 TRNP1Q6NT89 227 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 DPY19L2P1Q6NXN4 242 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 GJB7Q6PEY0 223 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 CRTC1Q6UUV9 634 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 PHACTR4Q8IZ21 702 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 IL12RB2Q99665 862 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 WDCPQ9H6R7 721 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 GDPD2Q9HCC8 539 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 MAN1B1Q9UKM7 699 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 PADI4Q9UM07 663 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 NEU3Q9UQ49 428 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 ACTL7AQ9Y615 435 aa12.4□□□□□ -0.42
UBR4-211ENST00000467272 TDRD6O60522 2096 aaKnown RBP12.4□□□□□ -0.42
UBR4-211ENST00000467272 C16orf96A6NNT2 1141 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 TOR1BO14657 336 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 NVLO15381 856 aaKnown RBP12.39□□□□□ -0.43
UBR4-211ENST00000467272 ENDOD1O94919 500 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 HSP90AA1P07900 732 aaKnown RBP12.39□□□□□ -0.43
UBR4-211ENST00000467272 CELA2BP08218 269 aaPredicted RBP12.39□□□□□ -0.43
UBR4-211ENST00000467272 TSHRP16473 764 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms