RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SLC4A5Q9BY07 1137 aa8.8□□□□□ -1
HPS4-209ENST00000466781 FKBP6O75344 327 aa8.8□□□□□ -1
HPS4-209ENST00000466781 MED26O95402 600 aa8.8□□□□□ -1
HPS4-209ENST00000466781 LDLRP01130 860 aa8.8□□□□□ -1
HPS4-209ENST00000466781 STAT5AP42229 794 aa8.8□□□□□ -1
HPS4-209ENST00000466781 FSTL1Q12841 308 aa8.8□□□□□ -1
HPS4-209ENST00000466781 MYBPC2Q14324 1141 aa8.8□□□□□ -1
HPS4-209ENST00000466781 AFTPHQ6ULP2 937 aa8.8□□□□□ -1
HPS4-209ENST00000466781 SCUBE3Q8IX30 993 aa8.8□□□□□ -1
HPS4-209ENST00000466781 ACTRT1Q8TDG2 376 aa8.8□□□□□ -1
HPS4-209ENST00000466781 VAT1Q99536 393 aa8.8□□□□□ -1
HPS4-209ENST00000466781 REEP1Q9H902 201 aa8.8□□□□□ -1
HPS4-209ENST00000466781 HMG20AQ9NP66 347 aa8.8□□□□□ -1
HPS4-209ENST00000466781 CORO2BQ9UQ03 480 aa8.8□□□□□ -1
HPS4-209ENST00000466781 SHOC2Q9UQ13 582 aa8.8□□□□□ -1
HPS4-209ENST00000466781 ISM1B1AKI9 464 aa8.8□□□□□ -1
HPS4-209ENST00000466781 E7ENQ6 273 aa8.8□□□□□ -1
HPS4-209ENST00000466781 DNALI1O14645 258 aaPredicted RBP8.8□□□□□ -1
HPS4-209ENST00000466781 HOXB8P17481 243 aaPredicted RBP8.8□□□□□ -1
HPS4-209ENST00000466781 ZNF280AP59817 542 aaPredicted RBP8.8□□□□□ -1
HPS4-209ENST00000466781 PPIGQ13427 754 aaKnown RBP eCLIP8.8□□□□□ -11e-8■■■□□ 15.2
HPS4-209ENST00000466781 SNAP47Q5SQN1 464 aa8.8□□□□□ -1
HPS4-209ENST00000466781 FBXO42Q6P3S6 717 aa8.8□□□□□ -1
HPS4-209ENST00000466781 KIAA0408Q6ZU52 694 aa8.8□□□□□ -1
HPS4-209ENST00000466781 CPA6Q8N4T0 437 aa8.8□□□□□ -1
HPS4-209ENST00000466781 SELENOMQ8WWX9 145 aa8.8□□□□□ -1
HPS4-209ENST00000466781 MIEF2Q96C03 454 aa8.8□□□□□ -1
HPS4-209ENST00000466781 KCNS3Q9BQ31 491 aa8.8□□□□□ -1
HPS4-209ENST00000466781 SEMA6BQ9H3T3 888 aa8.8□□□□□ -1
HPS4-209ENST00000466781 ASB8Q9H765 288 aa8.8□□□□□ -1
HPS4-209ENST00000466781 TMBIM4Q9HC24 238 aa8.8□□□□□ -1
HPS4-209ENST00000466781 PIH1D1Q9NWS0 290 aaKnown RBP8.8□□□□□ -1
HPS4-209ENST00000466781 NDUFA13Q9P0J0 144 aa8.8□□□□□ -1
HPS4-209ENST00000466781 KLQ9UEF7 1012 aa8.8□□□□□ -1
HPS4-209ENST00000466781 CACNB4O00305 520 aaPredicted RBP8.8□□□□□ -1
HPS4-209ENST00000466781 MRASO14807 208 aa8.8□□□□□ -1
HPS4-209ENST00000466781 ADH1CP00326 375 aa8.8□□□□□ -1
HPS4-209ENST00000466781 FAM228BP0C875 321 aa8.8□□□□□ -1
HPS4-209ENST00000466781 TPP2P29144 1249 aaPredicted RBP8.8□□□□□ -1
HPS4-209ENST00000466781 CHKAP35790 457 aa8.8□□□□□ -1
HPS4-209ENST00000466781 SEC24CP53992 1094 aa8.8□□□□□ -1
HPS4-209ENST00000466781 OTUD3Q5T2D3 398 aaPredicted RBP8.8□□□□□ -1
HPS4-209ENST00000466781 MCEMP1Q8IX19 187 aa8.8□□□□□ -1
HPS4-209ENST00000466781 ULK2Q8IYT8 1036 aa8.8□□□□□ -1
HPS4-209ENST00000466781 OR8D1Q8WZ84 308 aa8.8□□□□□ -1
HPS4-209ENST00000466781 SENP8Q96LD8 212 aa8.8□□□□□ -1
HPS4-209ENST00000466781 RNF145Q96MT1 663 aa8.8□□□□□ -1
HPS4-209ENST00000466781 PRDM16Q9HAZ2 1276 aa8.8□□□□□ -1
HPS4-209ENST00000466781 NOD2Q9HC29 1040 aa8.8□□□□□ -1
HPS4-209ENST00000466781 MRTO4Q9UKD2 239 aaKnown RBP8.8□□□□□ -1
HPS4-209ENST00000466781 A0A0B4J269 797 aa8.79□□□□□ -1
HPS4-209ENST00000466781 ENO4A6NNW6 628 aa8.79□□□□□ -1
HPS4-209ENST00000466781 ACKR2O00590 384 aa8.79□□□□□ -1
HPS4-209ENST00000466781 CYP3A4P08684 503 aa8.79□□□□□ -1
HPS4-209ENST00000466781 RPL3P39023 403 aaKnown RBP8.79□□□□□ -1
HPS4-209ENST00000466781 SCNN1GP51170 649 aa8.79□□□□□ -1
HPS4-209ENST00000466781 CDH8P55286 799 aa8.79□□□□□ -1
HPS4-209ENST00000466781 TBC1D25Q3MII6 688 aa8.79□□□□□ -1
HPS4-209ENST00000466781 FAM124AQ86V42 546 aa8.79□□□□□ -1
HPS4-209ENST00000466781 APLFQ8IW19 511 aaPredicted RBP8.79□□□□□ -1
HPS4-209ENST00000466781 ZC3H7AQ8IWR0 971 aaKnown RBP8.79□□□□□ -1
HPS4-209ENST00000466781 SNRNP27Q8WVK2 155 aaKnown RBP8.79□□□□□ -1
HPS4-209ENST00000466781 NELL1Q92832 810 aa8.79□□□□□ -1
HPS4-209ENST00000466781 ULBP1Q9BZM6 244 aa8.79□□□□□ -1
HPS4-209ENST00000466781 ZNF214Q9UL59 606 aaPredicted RBP8.79□□□□□ -1
HPS4-209ENST00000466781 ZNF780BQ9Y6R6 833 aa8.79□□□□□ -1
HPS4-209ENST00000466781 A0A096LPK6 155 aa8.79□□□□□ -1
HPS4-209ENST00000466781 AOC2O75106 756 aa8.79□□□□□ -1
HPS4-209ENST00000466781 ASGR1P07306 291 aa8.79□□□□□ -1
HPS4-209ENST00000466781 CSH1P0DML2 217 aa8.79□□□□□ -1
HPS4-209ENST00000466781 CSH2P0DML3 217 aa8.79□□□□□ -1
HPS4-209ENST00000466781 HDCP19113 662 aa8.79□□□□□ -1
HPS4-209ENST00000466781 IRF8Q02556 426 aa8.79□□□□□ -1
HPS4-209ENST00000466781 TRAF3Q13114 568 aa8.79□□□□□ -1
HPS4-209ENST00000466781 CAMK1DQ8IU85 385 aa8.79□□□□□ -1
HPS4-209ENST00000466781 CCDC185Q8N715 623 aa8.79□□□□□ -1
HPS4-209ENST00000466781 HJURPQ8NCD3 748 aaPredicted RBP8.79□□□□□ -1
HPS4-209ENST00000466781 HIPK3Q9H422 1215 aa8.79□□□□□ -1
HPS4-209ENST00000466781 DDX20Q9UHI6 824 aaKnown RBP8.79□□□□□ -1
HPS4-209ENST00000466781 VPS4AQ9UN37 437 aa8.79□□□□□ -1
HPS4-209ENST00000466781 ZNF510Q9Y2H8 683 aa8.79□□□□□ -1
HPS4-209ENST00000466781 GSTK1Q9Y2Q3 226 aa8.79□□□□□ -1
HPS4-209ENST00000466781 C15orf38-AP3S2A0A0A6YYH1 394 aa8.79□□□□□ -1
HPS4-209ENST00000466781 RECQL4O94761 1208 aa8.79□□□□□ -1
HPS4-209ENST00000466781 RCVRNP35243 200 aa8.79□□□□□ -1
HPS4-209ENST00000466781 IGFALSP35858 605 aa8.79□□□□□ -1
HPS4-209ENST00000466781 NOMO2Q5JPE7 1267 aa8.79□□□□□ -1
HPS4-209ENST00000466781 ARPINQ7Z6K5 226 aa8.79□□□□□ -1
HPS4-209ENST00000466781 IFNL1Q8IU54 200 aa8.79□□□□□ -1
HPS4-209ENST00000466781 ARMC8Q8IUR7 673 aa8.79□□□□□ -1
HPS4-209ENST00000466781 APOPT1Q96IL0 206 aa8.79□□□□□ -1
HPS4-209ENST00000466781 SEMA4BQ9NPR2 832 aaPredicted RBP8.79□□□□□ -1
HPS4-209ENST00000466781 DAPK2Q9UIK4 370 aa8.79□□□□□ -1
HPS4-209ENST00000466781 COG5Q9UP83 839 aa8.79□□□□□ -1
HPS4-209ENST00000466781 FARP2O94887 1054 aaPredicted RBP8.79□□□□□ -1
HPS4-209ENST00000466781 FAM58BPP0C7Q3 252 aa8.79□□□□□ -1
HPS4-209ENST00000466781 CD86P42081 329 aa8.79□□□□□ -1
HPS4-209ENST00000466781 STXBP5Q5T5C0 1151 aa8.79□□□□□ -1
HPS4-209ENST00000466781 KLHL35Q6PF15 583 aa8.79□□□□□ -1
HPS4-209ENST00000466781 CES3Q6UWW8 571 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms