RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 PPP1R16AQ96I34 528 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 GDAP1L1Q96MZ0 367 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 TSGA13Q96PP4 275 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 PSKH2Q96QS6 385 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 OMDQ99983 421 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 CALN1Q9BXU9 219 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 TM6SF2Q9BZW4 377 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 GRPEL1Q9HAV7 217 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 CAPN10Q9HC96 672 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 PREBQ9HCU5 417 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 DKK3Q9UBP4 350 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 DUSP10Q9Y6W6 482 aa9.62□□□□□ -0.87
SDCCAG3-208ENST00000466579 SHROOM3Q8TF72 1996 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 DCHS1Q96JQ0 3298 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 ANKRD36A6QL64 1941 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 TSPAN11A1L157 253 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 LRRC72A6NJI9 287 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 PRR5-ARHGAP8B1AHC4 643 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 DFFAO00273 331 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 ARHGAP6O43182 974 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 AP1G1O43747 822 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 SPOPO43791 374 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 MFSD11O43934 449 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 BNIP3LO60238 219 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 IGSF6O95976 241 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 SERPINF2P08697 491 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 CR2P20023 1033 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 CD27P26842 260 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 GJC1P36383 396 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 NUDT1P36639 197 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 HSPA9P38646 679 aaKnown RBP9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 GARSP41250 739 aaKnown RBP9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 RHOAP61586 193 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 ARHGAP8P85298 464 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 LMNB2Q03252 620 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 GRM3Q14832 879 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 DUOXA1Q1HG43 343 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 ZNF805Q5CZA5 627 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 ATXN7L2Q5T6C5 722 aaPredicted RBP9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 NEK5Q6P3R8 708 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 NCEH1Q6PIU2 408 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 ZNF662Q6ZS27 426 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 ERN2Q76MJ5 926 aaKnown RBP9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 ARMCX6Q7L4S7 300 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 TRIM69Q86WT6 500 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 ZNF354CQ86Y25 554 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 KIAA2013Q8IYS2 634 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 DEFB119Q8N690 84 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 PLD5Q8N7P1 536 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 NETO2Q8NC67 525 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 SPOCK2Q92563 424 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 BIRC7Q96CA5 298 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 TUBGCP5Q96RT8 1024 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 HINFPQ9BQA5 517 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 SP110Q9HB58 689 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 KLHL11Q9NVR0 708 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 SUSD2Q9UGT4 822 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 SEPT3Q9UH03 358 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 HYOU1Q9Y4L1 999 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 ADGRG1Q9Y653 693 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 PLXNA2O75051 1894 aa9.61□□□□□ -0.87
SDCCAG3-208ENST00000466579 DOCK9Q9BZ29 2069 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 CEP250Q9BV73 2442 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 A0A1B0GTW7 788 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 A0A1W2PPC4 97 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 LNP1A1A4G5 178 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 LRRD1A4D1F6 860 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 GRID2IPA4D2P6 1211 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 GOLGA6L3A6NEY3 463 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 MEI4A8MW99 385 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 PATE3B3GLJ2 98 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 PLK4O00444 970 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 KPNA3O00505 521 aaPredicted RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 KHNYNO15037 678 aaKnown RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 MUSKO15146 869 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 SPINT1O43278 529 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 PALMO75781 387 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 KRT1P04264 644 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 ADRB3P13945 408 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 ZFXP17010 805 aaPredicted RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 MX2P20592 715 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 CCNCP24863 283 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 CTNNA2P26232 953 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 GKP32189 559 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 CTNNA1P35221 906 aaKnown RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 CDKN2BP42772 138 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 RGRP47804 291 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 DNA2P51530 1060 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 RENBPP51606 427 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 SUOXP51687 545 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 NEK3P51956 506 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 GBE1Q04446 702 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 RAD51Q06609 339 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 SLC10A7Q0GE19 358 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 SLC10A2Q12908 348 aaPredicted RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 HNRNPDQ14103 355 aaKnown RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 LBRQ14739 615 aaKnown RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 SF3A2Q15428 464 aaKnown RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 CCDC6Q16204 474 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 IFI16Q16666 785 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms