RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 DDX6P26196 483 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS41-211ENST00000466017 CDC25CP30307 473 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 HOXC13P31276 330 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 STIP1P31948 543 aaKnown RBP5.65□□□□□ -1.5
VPS41-211ENST00000466017 MARCKSL1P49006 195 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 NR2C2P49116 596 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 CDH6P55285 790 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 SLC7A5Q01650 507 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 ZNF33AQ06730 810 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 TWF1Q12792 350 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 XRCC4Q13426 336 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 DHX34Q14147 1143 aaKnown RBP5.65□□□□□ -1.5
VPS41-211ENST00000466017 DPYSL3Q14195 570 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 PAFAH1B3Q15102 231 aaKnown RBP5.65□□□□□ -1.5
VPS41-211ENST00000466017 PTPROQ16827 1216 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 DUSP6Q16828 381 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 DPY19L1Q2PZI1 675 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 C5orf22Q49AR2 442 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 ODF2Q5BJF6 829 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 HECTD3Q5T447 861 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 SLC9A4Q6AI14 798 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 TXNRD3NBQ6F5E7 133 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 CCDC70Q6NSX1 233 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 WDR93Q6P2C0 686 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 SCYL2Q6P3W7 929 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 TAC4Q86UU9 113 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 CPNE8Q86YQ8 564 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 LRRC49Q8IUZ0 686 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 ZDHHC14Q8IZN3 488 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 LZTR1Q8N653 840 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 ANKS4BQ8N8V4 417 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 ATP6V0D2Q8N8Y2 350 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 PRELID2Q8N945 189 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 C19orf47Q8N9M1 422 aaKnown RBP5.65□□□□□ -1.5
VPS41-211ENST00000466017 ATL2Q8NHH9 583 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 SLC35B2Q8TB61 432 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 SLC7A14Q8TBB6 771 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS41-211ENST00000466017 CASP10Q92851 521 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 NKD2Q969F2 451 aaPredicted RBP5.65□□□□□ -1.5
VPS41-211ENST00000466017 PPP2R3CQ969Q6 453 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 CCDC120Q96HB5 630 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 MS4A14Q96JA4 679 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 FCRL2Q96LA5 508 aaPredicted RBP5.65□□□□□ -1.5
VPS41-211ENST00000466017 PEBP4Q96S96 227 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 SNRNP25Q9BV90 132 aaKnown RBP5.65□□□□□ -1.5
VPS41-211ENST00000466017 MAK16Q9BXY0 300 aaKnown RBP5.65□□□□□ -1.5
VPS41-211ENST00000466017 FAM129AQ9BZQ8 928 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 BRD8Q9H0E9 1235 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 ENTPD7Q9NQZ7 604 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 PIGVQ9NUD9 493 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 DDIT4Q9NX09 232 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 OSER1Q9NX31 292 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 CALCOCO1Q9P1Z2 691 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 PPARGC1AQ9UBK2 798 aaKnown RBP5.65□□□□□ -1.5
VPS41-211ENST00000466017 FBLN5Q9UBX5 448 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 PCSK1NQ9UHG2 260 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 STOML2Q9UJZ1 356 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 RAB21Q9UL25 225 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 HCFC2Q9Y5Z7 792 aa5.65□□□□□ -1.5
VPS41-211ENST00000466017 BRCA2P51587 3418 aa5.65□□□□□ -1.51
VPS41-211ENST00000466017 IGLV3-10A0A075B6K4 115 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 LRRD1A4D1F6 860 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 DRGXA6NNA5 263 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 HACD1B0YJ81 288 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 ETV2O00321 342 aaPredicted RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 ZNF197O14709 1029 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 NCAM2O15394 837 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 TLR5O60602 858 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 PHF2O75151 1096 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 GSNP06396 782 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 ITGAVP06756 1048 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 CD3EP07766 207 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 MYOGP15173 224 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 TCF4P15884 667 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 COILP38432 576 aaPredicted RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 ARL4AP40617 200 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 SSR1P43307 286 aaKnown RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 PGFP49763 221 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 ATXN1P54253 815 aaKnown RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 TBX4P57082 545 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 PITX1P78337 314 aaPredicted RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 SLC7A9P82251 487 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 MVKQ03426 396 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 TAF12Q16514 161 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 CDO1Q16878 200 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 ANKRD20A8PQ5CZ79 823 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 KCNT1Q5JUK3 1230 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 PPM1LQ5SGD2 360 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 MANEALQ5VSG8 457 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 SDHAF4Q5VUM1 108 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 NUGGCQ68CJ6 796 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 FAM109BQ6ICB4 259 aaPredicted RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 MRM1Q6IN84 353 aaKnown RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 AADACL2Q6P093 401 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 VHLLQ6RSH7 139 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 C4orf22Q6V702 233 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 PDZD4Q76G19 769 aaPredicted RBP5.64□□□□□ -1.51
VPS41-211ENST00000466017 ANKS1BQ7Z6G8 1248 aa5.64□□□□□ -1.51
VPS41-211ENST00000466017 ZNF605Q86T29 641 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms