RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 MAP3K6O95382 1288 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 POP4O95707 220 aaKnown RBP20.62■□□□□ 0.89
SKA3-205ENST00000465471 SEMA4FO95754 770 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 MX2P20592 715 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 ITGB7P26010 798 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 PTPN7P35236 360 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 RGRP47804 291 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 ADPRHP54922 357 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 COPS2P61201 443 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 ADCY2Q08462 1091 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 CNTN1Q12860 1018 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 LBRQ14739 615 aaKnown RBP20.62■□□□□ 0.89
SKA3-205ENST00000465471 ODF2Q5BJF6 829 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 PIP5KL1Q5T9C9 394 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 PEAR1Q5VY43 1037 aaPredicted RBP20.62■□□□□ 0.89
SKA3-205ENST00000465471 PEX26Q7Z412 305 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 HDDC3Q8N4P3 179 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 TEX26Q8N6G2 289 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 TSEN2Q8NCE0 465 aaKnown RBP20.62■□□□□ 0.89
SKA3-205ENST00000465471 OR6K2Q8NGY2 324 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.62■□□□□ 0.89
SKA3-205ENST00000465471 MAML1Q92585 1016 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 HDAC11Q96DB2 347 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 MAK16Q9BXY0 300 aaKnown RBP20.62■□□□□ 0.89
SKA3-205ENST00000465471 HDAC8Q9BY41 377 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 CPEB1Q9BZB8 566 aaKnown RBP20.62■□□□□ 0.89
SKA3-205ENST00000465471 ZDHHC6Q9H6R6 413 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 SEPT3Q9UH03 358 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 GMEB2Q9UKD1 530 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 AMFRQ9UKV5 643 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 GUCA1BQ9UMX6 200 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 PPP2R2CQ9Y2T4 447 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 BCLAF3A2AJT9 711 aaKnown RBP20.61■□□□□ 0.89
SKA3-205ENST00000465471 MIF4GDA9UHW6 222 aaKnown RBP20.61■□□□□ 0.89
SKA3-205ENST00000465471 PLK4O00444 970 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 KPNA3O00505 521 aaPredicted RBP20.61■□□□□ 0.89
SKA3-205ENST00000465471 FTCDO95954 541 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 KRT10P13645 584 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 CCNCP24863 283 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 GKP32189 559 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 ZNF33AQ06730 810 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 NSUN2Q08J23 767 aaKnown RBP eCLIP20.61■□□□□ 0.89
SKA3-205ENST00000465471 TFDP2Q14188 446 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 POM121L1PQ3SYA9 428 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 PLA2G2CQ5R387 149 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 LYSMD4Q5XG99 296 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 RFX6Q8HWS3 928 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 FOXJ1Q92949 421 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 HES6Q96HZ4 224 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 PPP1R16AQ96I34 528 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 EXOC2Q96KP1 924 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 HSPA12BQ96MM6 686 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 CINPQ9BW66 212 aaPredicted RBP20.61■□□□□ 0.89
SKA3-205ENST00000465471 OSBPL1AQ9BXW6 950 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 C6orf106Q9H6K1 298 aaPredicted RBP20.61■□□□□ 0.89
SKA3-205ENST00000465471 NCDNQ9UBB6 729 aa20.61■□□□□ 0.89
SKA3-205ENST00000465471 EVLQ9UI08 416 aaPredicted RBP20.61■□□□□ 0.89
SKA3-205ENST00000465471 METTL12A8MUP2 240 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 KRIT1O00522 736 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 MATN3O15232 486 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 INSIG1O15503 277 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 DDX3YO15523 660 aaKnown RBP20.6■□□□□ 0.89
SKA3-205ENST00000465471 PLRG1O43660 514 aaKnown RBP20.6■□□□□ 0.89
SKA3-205ENST00000465471 LRP3O75074 770 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 CR2P20023 1033 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 TGM1P22735 817 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 HSPA9P38646 679 aaKnown RBP20.6■□□□□ 0.89
SKA3-205ENST00000465471 DHPSP49366 369 aaPredicted RBP20.6■□□□□ 0.89
SKA3-205ENST00000465471 RWDD2BP57060 319 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 TAS2R38P59533 333 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 PPIDQ08752 370 aaKnown RBP20.6■□□□□ 0.89
SKA3-205ENST00000465471 HNRNPDQ14103 355 aaKnown RBP20.6■□□□□ 0.89
SKA3-205ENST00000465471 TIGD7Q6NT04 549 aaPredicted RBP20.6■□□□□ 0.89
SKA3-205ENST00000465471 NPNTQ6UXI9 565 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 PGBD5Q8N414 524 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 RYBPQ8N488 228 aaPredicted RBP20.6■□□□□ 0.89
SKA3-205ENST00000465471 OR2T34Q8NGX1 318 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 GANCQ8TET4 914 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 UBE2Q2Q8WVN8 375 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 MGME1Q9BQP7 344 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 KDM4CQ9H3R0 1056 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 EFR3BQ9Y2G0 817 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 ANKRD36A6QL64 1941 aa20.6■□□□□ 0.89
SKA3-205ENST00000465471 CST8O60676 142 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 TGM2P21980 687 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 MPLP40238 635 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 NR2C2P49116 596 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 RENBPP51606 427 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 DYNLT1P63172 113 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 ZNF805Q5CZA5 627 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.59■□□□□ 0.89
SKA3-205ENST00000465471 BBS12Q6ZW61 710 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 ERN2Q76MJ5 926 aaKnown RBP20.59■□□□□ 0.89
SKA3-205ENST00000465471 PARS2Q7L3T8 475 aaKnown RBP20.59■□□□□ 0.89
SKA3-205ENST00000465471 ARMCX6Q7L4S7 300 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 CYP2U1Q7Z449 544 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 CCDC50Q8IVM0 306 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 DEFB119Q8N690 84 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 DNASE2BQ8WZ79 361 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 ZNF830Q96NB3 372 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms