RNA–Protein interactions for RNA: ENST00000464756.6

NFXL1-203, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 3,865 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-203ENST00000464756 TMEM39AQ9NV64 488 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 WWOXQ9NZC7 414 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 CNTN3Q9P232 1028 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 PCDHB9Q9Y5E1 797 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 TEX264Q9Y6I9 313 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 SF3B1O75533 1304 aaKnown RBP eCLIP12.98□□□□□ -0.33
NFXL1-203ENST00000464756 CRTAMO95727 393 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 PTDSS1P48651 473 aaKnown RBP12.98□□□□□ -0.33
NFXL1-203ENST00000464756 BIRC2Q13490 618 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 ARHGEF7Q14155 803 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 ARHGAP36Q6ZRI8 547 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 KYQ8NBH2 561 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 ESAMQ96AP7 390 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 ACOX2Q99424 681 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 CLPBQ9H078 707 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 FLRT1Q9NZU1 646 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 ZMYM5Q9UJ78 669 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 BTRCQ9Y297 605 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 NHSQ6T4R5 1651 aa12.98□□□□□ -0.33
NFXL1-203ENST00000464756 CDK5RAP2Q96SN8 1893 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 RBP1P09455 135 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 HIST1H2AGP0C0S8 130 aaPredicted RBP12.97□□□□□ -0.33
NFXL1-203ENST00000464756 RAG1P15918 1043 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 HIST1H2ADP20671 130 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 WARSP23381 471 aaKnown RBP12.97□□□□□ -0.33
NFXL1-203ENST00000464756 CDH5P33151 784 aaPredicted RBP12.97□□□□□ -0.33
NFXL1-203ENST00000464756 RPL14P50914 215 aaKnown RBP12.97□□□□□ -0.33
NFXL1-203ENST00000464756 PDE1CQ14123 709 aaPredicted RBP12.97□□□□□ -0.33
NFXL1-203ENST00000464756 MAP7Q14244 749 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 KCNJ11Q14654 390 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 PTPRNQ16849 979 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 CAND1Q86VP6 1230 aaKnown RBP12.97□□□□□ -0.33
NFXL1-203ENST00000464756 PBXIP1Q96AQ6 731 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 ZNF333Q96JL9 665 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 HIST1H2AHQ96KK5 128 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 HIST1H2AJQ99878 128 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 H2AFJQ9BTM1 129 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 CCDC90BQ9GZT6 254 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 BRD8Q9H0E9 1235 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 COG4Q9H9E3 785 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 SAR1AQ9NR31 198 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 HBS1LQ9Y450 684 aaKnown RBP12.97□□□□□ -0.33
NFXL1-203ENST00000464756 PCDHGC4Q9Y5F7 938 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 FGF10O15520 208 aaPredicted RBP12.97□□□□□ -0.33
NFXL1-203ENST00000464756 TOMM70O94826 608 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 HDCP19113 662 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 PROZP22891 400 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 GATMP50440 423 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 PCYOX1LQ8NBM8 494 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 TRPC4APQ8TEL6 797 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 ACBD6Q9BR61 282 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 NFKBIZQ9BYH8 718 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 TRIM54Q9BYV2 358 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 ING2Q9H160 280 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 ADAMTS10Q9H324 1103 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 DENND2DQ9H6A0 471 aaPredicted RBP12.97□□□□□ -0.33
NFXL1-203ENST00000464756 USP29Q9HBJ7 922 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 VCX3AQ9NNX9 186 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 COPG2Q9UBF2 871 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 EVPLQ92817 2033 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 PLIN3O60664 434 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 PEX11AO75192 247 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 FGFR3P22607 806 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 PBLDP30039 288 aaPredicted RBP12.97□□□□□ -0.33
NFXL1-203ENST00000464756 GABRB2P47870 512 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 ELAVL2Q12926 359 aaKnown RBP12.97□□□□□ -0.33
NFXL1-203ENST00000464756 RIPOR1Q6ZS17 1223 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 ZNF280BQ86YH2 543 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 PTGR2Q8N8N7 351 aaPredicted RBP12.97□□□□□ -0.33
NFXL1-203ENST00000464756 HMCESQ96FZ2 354 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 AK5Q9Y6K8 562 aa12.97□□□□□ -0.33
NFXL1-203ENST00000464756 RAB10P61026 200 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 STX5Q13190 355 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 ARL13AQ5H913 290 aaPredicted RBP12.96□□□□□ -0.33
NFXL1-203ENST00000464756 TDRPQ86YL5 185 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 FBXO39Q8N4B4 442 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 ZNF781Q8N8C0 355 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 CEP70Q8NHQ1 597 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 CNDP1Q96KN2 507 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 THUMPD3Q9BV44 507 aaKnown RBP12.96□□□□□ -0.33
NFXL1-203ENST00000464756 SEMA6AQ9H2E6 1030 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 GKN1Q9NS71 199 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 PNMA8BQ9ULN7 279 aaPredicted RBP12.96□□□□□ -0.33
NFXL1-203ENST00000464756 DTNAQ9Y4J8 743 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 PIRO00625 290 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 ITM2AO43736 263 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 TPBGLP0DKB5 382 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 RGS4P49798 205 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 KCNK10P57789 538 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 RPS24P62847 133 aaKnown RBP12.96□□□□□ -0.33
NFXL1-203ENST00000464756 FASTKQ14296 549 aaKnown RBP12.96□□□□□ -0.33
NFXL1-203ENST00000464756 TCEAL1Q15170 157 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 HECTD3Q5T447 861 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 AGMOQ6ZNB7 445 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 LRRC74BQ6ZQY2 392 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 MFN1Q8IWA4 741 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 SMG8Q8ND04 991 aaKnown RBP12.96□□□□□ -0.33
NFXL1-203ENST00000464756 CXorf38Q8TB03 319 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 PRKD2Q9BZL6 878 aa12.96□□□□□ -0.33
NFXL1-203ENST00000464756 DRC3Q9H069 523 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms