RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SOWAHAQ2M3V2 549 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 SLC10A6Q3KNW5 377 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 LYSMD3Q7Z3D4 306 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 UNC93AQ86WB7 457 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 PYROXD2Q8N2H3 581 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 AFAP1L2Q8N4X5 818 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 PCDH20Q8N6Y1 951 aaKnown RBP7.39□□□□□ -1.23
USP48-206ENST00000464577 ZNF280CQ8ND82 737 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 OR2T34Q8NGX1 318 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 OR2T3Q8NH03 318 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 ZUFSPQ96AP4 578 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 ITPKCQ96DU7 683 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 SCYL1Q96KG9 808 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 CNDP2Q96KP4 475 aaKnown RBP7.39□□□□□ -1.23
USP48-206ENST00000464577 CIB1Q99828 191 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 NPLQ9BXD5 320 aaPredicted RBP7.39□□□□□ -1.23
USP48-206ENST00000464577 B3GNT5Q9BYG0 378 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 PCDHAC1Q9H158 963 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 UPF3AQ9H1J1 476 aaKnown RBP7.39□□□□□ -1.23
USP48-206ENST00000464577 PRDM12Q9H4Q4 367 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 IARS2Q9NSE4 1012 aaKnown RBP7.39□□□□□ -1.23
USP48-206ENST00000464577 SETD4Q9NVD3 440 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 DPP3Q9NY33 737 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 TMEM9Q9P0T7 183 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 SEPT10Q9P0V9 454 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 KLHL8Q9P2G9 620 aaPredicted RBP7.39□□□□□ -1.23
USP48-206ENST00000464577 TUBGCP4Q9UGJ1 667 aa7.39□□□□□ -1.23
USP48-206ENST00000464577 TDRKHQ9Y2W6 561 aaKnown RBP7.39□□□□□ -1.23
USP48-206ENST00000464577 HEMK1Q9Y5R4 338 aaPredicted RBP7.39□□□□□ -1.23
USP48-206ENST00000464577 PRORSD1PA6NEY8 169 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 AQP12BA6NM10 295 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 C19orf81C9J6K1 198 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 FBP2O00757 339 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 SOCS2O14508 198 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 MTSS1O43312 755 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 NELFEP18615 380 aaKnown RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 CYP2B6P20813 491 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 ABCG1P45844 678 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 KPNA2P52292 529 aaKnown RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 GTF2A2P52657 109 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 CDH15P55291 814 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 CTBSQ01459 385 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 RELAQ04206 551 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 BST2Q10589 180 aaKnown RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 FASTKQ14296 549 aaKnown RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 USP10Q14694 798 aaKnown RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 AMHR2Q16671 573 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 UGP2Q16851 508 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 SLC25A52Q3SY17 297 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 TSTD2Q5T7W7 516 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 ITPRIPL1Q6GPH6 555 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 TTC33Q6PID6 262 aaPredicted RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 DCLRE1AQ6PJP8 1040 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 CATSPERGQ6ZRH7 1159 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 NCCRP1Q6ZVX7 275 aaPredicted RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 PDZD4Q76G19 769 aaPredicted RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 PID1Q7Z2X4 250 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 ACOT1Q86TX2 421 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 DHFR2Q86XF0 187 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 CAMK1DQ8IU85 385 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 AQP12AQ8IXF9 295 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 CENPLQ8N0S6 344 aaPredicted RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 FSTL5Q8N475 847 aaPredicted RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 CCNYQ8ND76 341 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 ACVR1CQ8NER5 493 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 HMGCLL1Q8TB92 370 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 TBC1D15Q8TC07 691 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 KCTD4Q8WVF5 259 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 MFSD3Q96ES6 412 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 GPR78Q96P69 363 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 SLC25A23Q9BV35 468 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 YTHDF1Q9BYJ9 559 aaKnown RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 CEP41Q9BYV8 373 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 RHOBTB2Q9BYZ6 727 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 TRIM15Q9C019 465 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 BRD8Q9H0E9 1235 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 GBA3Q9H227 469 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 MRPL46Q9H2W6 279 aaKnown RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 SNX25Q9H3E2 840 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 RPF2Q9H7B2 306 aaKnown RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 NOL11Q9H8H0 719 aaKnown RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 MINDY3Q9H8M7 445 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 MEAF6Q9HAF1 191 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 CD320Q9NPF0 282 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 CCM2LQ9NUG4 571 aaPredicted RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 FAM49BQ9NUQ9 324 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 SLC38A7Q9NVC3 462 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 NCKIPSDQ9NZQ3 722 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 XPR1Q9UBH6 696 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 GNPTGQ9UJJ9 305 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 CROTQ9UKG9 612 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 RUVBL2Q9Y230 463 aaKnown RBP7.38□□□□□ -1.23
USP48-206ENST00000464577 ZNF711Q9Y462 761 aa7.38□□□□□ -1.23
USP48-206ENST00000464577 SOBPA7XYQ1 873 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 H3BMQ9 156 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 DLGAP1O14490 977 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 MRASO14807 208 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 DCLK1O15075 740 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 NCAM2O15394 837 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 DAB1O75553 588 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms