RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TBC1D3DA0A087WVF3 549 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 TBC1D3IA0A087WXS9 549 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 TBC1D3EA0A087X179 549 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 TBC1D3KA0A087X1G2 549 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 LNP1A1A4G5 178 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 GRID2IPA4D2P6 1211 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 TBC1D3FA6NER0 549 aaPredicted RBP17.31■□□□□ 0.36
VPS52-215ENST00000464425 LRRC72A6NJI9 287 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 TBC1D3LB9A6J9 549 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 KRIT1O00522 736 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 PRAMEF11O60813 436 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 GSRP00390 522 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 TBC1D3HP0C7X1 549 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 TNNT1P13805 278 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 GNSP15586 552 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 HOXD12P35452 270 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 RHOAP61586 193 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 SNRPD1P62314 119 aaKnown RBP17.31■□□□□ 0.36
VPS52-215ENST00000464425 DPYSL3Q14195 570 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 MYLK3Q32MK0 819 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 INO80DQ53TQ3 878 aaPredicted RBP17.31■□□□□ 0.36
VPS52-215ENST00000464425 AGBL4Q5VU57 503 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 KIAA0895LQ68EN5 471 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 TBC1D3GQ6DHY5 549 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 TBC1D3CQ6IPX1 549 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 RHOT1Q8IXI2 618 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 TBC1D3Q8IZP1 549 aaPredicted RBP17.31■□□□□ 0.36
VPS52-215ENST00000464425 ZCCHC9Q8N567 271 aaKnown RBP17.31■□□□□ 0.36
VPS52-215ENST00000464425 LZTR1Q8N653 840 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 OR2AP1Q8NGE2 309 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 OR2T34Q8NGX1 318 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 CEP76Q8TAP6 659 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 FAM71BQ8TC56 605 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 CASKIN2Q8WXE0 1202 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 RMDN1Q96DB5 314 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 NUSAP1Q9BXS6 441 aaKnown RBP17.31■□□□□ 0.36
VPS52-215ENST00000464425 LZTFL1Q9NQ48 299 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 DYRK4Q9NR20 520 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 DMXL1Q9Y485 3027 aa17.31■□□□□ 0.36
VPS52-215ENST00000464425 PI4KAP42356 2102 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 SPOPO43791 374 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 IGHV4-34P06331 123 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 SLC23A3Q6PIS1 610 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 REXO1L1PQ8IX06 675 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 PLPP6Q8IY26 295 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 RAPGEF5Q92565 580 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 EXOC2Q96KP1 924 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 EDEM2Q9BV94 578 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 SP110Q9HB58 689 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 PDFQ9HBH1 243 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 RCOR3Q9P2K3 495 aaPredicted RBP17.3■□□□□ 0.36
VPS52-215ENST00000464425 EVLQ9UI08 416 aaPredicted RBP17.3■□□□□ 0.36
VPS52-215ENST00000464425 IPO11Q9UI26 975 aaKnown RBP17.3■□□□□ 0.36
VPS52-215ENST00000464425 CDV3Q9UKY7 258 aaKnown RBP17.3■□□□□ 0.36
VPS52-215ENST00000464425 SLC6A14Q9UN76 642 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 SLCO1B1Q9Y6L6 691 aa17.3■□□□□ 0.36
VPS52-215ENST00000464425 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.3■□□□□ 0.36
VPS52-215ENST00000464425 TNRC6BQ9UPQ9 1833 aaKnown RBP17.3■□□□□ 0.36
VPS52-215ENST00000464425 NYNRINQ9P2P1 1898 aaKnown RBP17.29■□□□□ 0.36
VPS52-215ENST00000464425 BCAT2O15382 392 aaPredicted RBP17.29■□□□□ 0.36
VPS52-215ENST00000464425 SLC7A4O43246 635 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 PSTPIP1O43586 416 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 PALMO75781 387 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 POP4O95707 220 aaKnown RBP17.29■□□□□ 0.36
VPS52-215ENST00000464425 SERPINF2P08697 491 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 MAPK8P45983 427 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 PDK2Q15119 407 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 HS1BP3Q53T59 392 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 ANKRD20A8PQ5CZ79 823 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 PIP5KL1Q5T9C9 394 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 ERN2Q76MJ5 926 aaKnown RBP17.29■□□□□ 0.36
VPS52-215ENST00000464425 RABEPKQ7Z6M1 372 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 MAP7D3Q8IWC1 876 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 NETO1Q8TDF5 533 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 FAM131CQ96AQ9 280 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 GDAP1L1Q96MZ0 367 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 GOLPH3Q9H4A6 298 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 DDX56Q9NY93 547 aaKnown RBP17.29■□□□□ 0.36
VPS52-215ENST00000464425 LHX3Q9UBR4 397 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 SUSD2Q9UGT4 822 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.29■□□□□ 0.36
VPS52-215ENST00000464425 LAMA1P25391 3075 aa17.29■□□□□ 0.36
VPS52-215ENST00000464425 SPTBN4Q9H254 2564 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 A0A1B0GTW7 788 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 C4orf47A7E2U8 309 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 INSIG1O15503 277 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 PLRG1O43660 514 aaKnown RBP17.28■□□□□ 0.36
VPS52-215ENST00000464425 IGSF6O95976 241 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 UGT2B4P06133 528 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 ENGP17813 658 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 KDELR1P24390 212 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 CD27P26842 260 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 ID4P47928 161 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 TAS2R38P59533 333 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 PPP2CBP62714 309 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 PPP2CAP67775 309 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 IL10RBQ08334 325 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 STPG1Q5TH74 334 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 NT5DC3Q86UY8 548 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 VSIG1Q86XK7 387 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 394.2 ms