RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 GULP1Q9UBP9 304 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 DOLKQ9UPQ8 538 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 WASF2Q9Y6W5 498 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 DOCK9Q9BZ29 2069 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 A0A0D9SEW6 157 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 NTN3O00634 580 aaPredicted RBP14.74□□□□□ -0.05
SMC1A-204ENST00000463684 YY2O15391 372 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 NTRK1P04629 796 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 GNA15P30679 374 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 UGT1A5P35504 534 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 PDX1P52945 283 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 SLC20A2Q08357 652 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 STIM1Q13586 685 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 TGIF1Q15583 401 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 ALFQ53S48 1182 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 CARD16Q5EG05 197 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 TPRG1LQ5T0D9 272 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 LURAP1LQ8IV03 231 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 PHACTR4Q8IZ21 702 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 PCDH20Q8N6Y1 951 aaKnown RBP14.74□□□□□ -0.05
SMC1A-204ENST00000463684 DENND6BQ8NEG7 585 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 ASB12Q8WXK4 309 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 RAB7BQ96AH8 199 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 PPP1R13BQ96KQ4 1090 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 GFM1Q96RP9 751 aaKnown RBP14.74□□□□□ -0.05
SMC1A-204ENST00000463684 SEMA3CQ99985 751 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 SPON2Q9BUD6 331 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 CEP44Q9C0F1 390 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 TKTL2Q9H0I9 626 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 TCEAL2Q9H3H9 227 aaPredicted RBP14.74□□□□□ -0.05
SMC1A-204ENST00000463684 UBE2TQ9NPD8 197 aaPredicted RBP14.74□□□□□ -0.05
SMC1A-204ENST00000463684 SEPT3Q9UH03 358 aa14.74□□□□□ -0.05
SMC1A-204ENST00000463684 TDRD6O60522 2096 aaKnown RBP14.73□□□□□ -0.05
SMC1A-204ENST00000463684 PSMA7O14818 248 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 CASC3O15234 703 aaKnown RBP14.73□□□□□ -0.05
SMC1A-204ENST00000463684 NOBOXO60393 691 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 SMC2O95347 1197 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 AFPP02771 609 aaKnown RBP14.73□□□□□ -0.05
SMC1A-204ENST00000463684 FAM87AP0C7U9 286 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 JMJD7P0C870 316 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 ITGB6P18564 788 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 OR1E1P30953 314 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 NOS2P35228 1153 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 SNX16P57768 344 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 MANEAQ5SRI9 462 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 C11orf57Q6ZUT1 292 aaPredicted RBP14.73□□□□□ -0.05
SMC1A-204ENST00000463684 PARS2Q7L3T8 475 aaKnown RBP14.73□□□□□ -0.05
SMC1A-204ENST00000463684 TFAP2DQ7Z6R9 452 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 TMEM74Q96NL1 305 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 CPXM1Q96SM3 734 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 SCAND2PQ9GZW5 306 aaPredicted RBP14.73□□□□□ -0.05
SMC1A-204ENST00000463684 ACSL6Q9UKU0 697 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 SPTA1P02549 2419 aa14.73□□□□□ -0.05
SMC1A-204ENST00000463684 DRGXA6NNA5 263 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 NVLO15381 856 aaKnown RBP14.72□□□□□ -0.05
SMC1A-204ENST00000463684 PPFIA2O75334 1257 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 ZNF821O75541 412 aaPredicted RBP14.72□□□□□ -0.05
SMC1A-204ENST00000463684 LIPCP11150 499 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 TSHRP16473 764 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 SERPINH1P50454 418 aaKnown RBP14.72□□□□□ -0.05
SMC1A-204ENST00000463684 BLKP51451 505 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 CCNHP51946 323 aaPredicted RBP14.72□□□□□ -0.05
SMC1A-204ENST00000463684 YPEL5P62699 121 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 PPARDQ03181 441 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 BRMS1LQ5PSV4 323 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 ACBD5Q5T8D3 534 aaPredicted RBP14.72□□□□□ -0.05
SMC1A-204ENST00000463684 B3GNT8Q7Z7M8 397 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 RYBPQ8N488 228 aaPredicted RBP14.72□□□□□ -0.05
SMC1A-204ENST00000463684 ARL10Q8N8L6 244 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 OR7D4Q8NG98 312 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 ARHGEF26Q96DR7 871 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 LRRC61Q9BV99 259 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 CLPBQ9H078 707 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 INTS2Q9H0H0 1204 aaKnown RBP14.72□□□□□ -0.05
SMC1A-204ENST00000463684 ZDHHC6Q9H6R6 413 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 ARHGEF38Q9NXL2 777 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 RRN3Q9NYV6 651 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 MPP6Q9NZW5 540 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 HECAQ9UBI9 543 aaPredicted RBP14.72□□□□□ -0.05
SMC1A-204ENST00000463684 PAXBP1Q9Y5B6 917 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 PCDHB11Q9Y5F2 797 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 BOD1L1Q8NFC6 3051 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 COL12A1Q99715 3063 aa14.72□□□□□ -0.05
SMC1A-204ENST00000463684 ILVBLA1L0T0 632 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 C16orf96A6NNT2 1141 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 TOR1BO14657 336 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 DAB1O75553 588 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 ALPIP09923 528 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 CTSEP14091 401 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 HGFP14210 728 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 USP8P40818 1118 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 CXCR3P49682 368 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 CCL7P80098 99 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 SRSF6Q13247 344 aaKnown RBP14.71□□□□□ -0.05
SMC1A-204ENST00000463684 ELOCQ15369 112 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 TBR1Q16650 682 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 LVRNQ6Q4G3 990 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 ZNF783Q6ZMS7 281 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 FAM183BPQ6ZVS7 135 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 ENOSF1Q7L5Y1 443 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms