RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 TXNRD3NBQ6F5E7 133 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 NPWQ8N729 165 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 KCTD6Q8NC69 237 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 FATE1Q969F0 183 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 ARRDC3Q96B67 414 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 CELF6Q96J87 481 aaKnown RBP13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 TUBGCP5Q96RT8 1024 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 DDX56Q9NY93 547 aaKnown RBP13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 DKK3Q9UBP4 350 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 LHX3Q9UBR4 397 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 EPN1Q9Y6I3 576 aaPredicted RBP13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 NUMA1Q14980 2115 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 A0A1W2PPC4 97 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 BTNL10A8MVZ5 291 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 FSBPO95073 299 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 NDUFA10O95299 355 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 AMPD1P23109 780 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 MAPK8P45983 427 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 GRIA4P48058 902 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 AFF3P51826 1226 aaKnown RBP13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 PAFAH1B3Q15102 231 aaKnown RBP13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 CYTH1Q15438 398 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 TCEAL6Q6IPX3 200 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 PRPF39Q86UA1 669 aaKnown RBP13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 TCEAL3Q969E4 200 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 SKA1Q96BD8 255 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 RMDN1Q96DB5 314 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 TM6SF2Q9BZW4 377 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 SMOC1Q9H4F8 434 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 ZDHHC6Q9H6R6 413 aa13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 EIF2B4Q9UI10 523 aaKnown RBP13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 IPO11Q9UI26 975 aaKnown RBP13.27□□□□□ -0.29
R3HDM1-213ENST00000463230 CACNA1EQ15878 2313 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 VPS13AQ96RL7 3174 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 UPK3BL1B0FP48 263 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 PATE3B3GLJ2 98 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 UPK3BL2E5RIL1 263 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 ARHGAP33O14559 1287 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 RNGTTO60942 597 aaKnown RBP13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 ENGP17813 658 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 IL4RP24394 825 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 TAS2R40P59535 323 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 RACK1P63244 317 aaKnown RBP13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 NSUN2Q08J23 767 aaKnown RBP eCLIP13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 PDAP1Q13442 181 aaKnown RBP13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 SLC45A4Q5BKX6 768 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 C11orf63Q6NUN7 778 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 BBS5Q8N3I7 341 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 RYBPQ8N488 228 aaPredicted RBP13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 ZCCHC9Q8N567 271 aaKnown RBP13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 GRIN3AQ8TCU5 1115 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 SNX19Q92543 992 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 ORAI3Q9BRQ5 295 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 SEPT3Q9UH03 358 aa13.26□□□□□ -0.29
R3HDM1-213ENST00000463230 TBC1D3DA0A087WVF3 549 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TBC1D3IA0A087WXS9 549 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TBC1D3EA0A087X179 549 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TBC1D3KA0A087X1G2 549 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TBC1D3FA6NER0 549 aaPredicted RBP13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TBC1D3LB9A6J9 549 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 DFFAO00273 331 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TBC1D3HP0C7X1 549 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 GSDMDP57764 484 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 SETMARQ53H47 684 aaPredicted RBP13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 ANKRD20A8PQ5CZ79 823 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 RALGPS1Q5JS13 557 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TBC1D3GQ6DHY5 549 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TBC1D3CQ6IPX1 549 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 KIAA1161Q6NSJ0 714 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 RHOT1Q8IXI2 618 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TBC1D3Q8IZP1 549 aaPredicted RBP13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 NSMCE1Q8WV22 266 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 ZNF641Q96N77 438 aaPredicted RBP13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 BAG1Q99933 345 aaPredicted RBP13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 MIR1-1HGQ9H1L0 117 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TM9SF3Q9HD45 589 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 HAUS2Q9NVX0 235 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 ACTL7AQ9Y615 435 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TSPAN11A1L157 253 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TMEM110-MUSTN1A8MSY1 372 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 J3KR12 359 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 KRIT1O00522 736 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 PSTPIP1O43586 416 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 DFNA5O60443 496 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 PALMO75781 387 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 ZNF883P0CG24 379 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 ADRB3P13945 408 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 MAOBP27338 520 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 METAP1P53582 386 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 ATXN3P54252 364 aaPredicted RBP13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 TAS2R38P59533 333 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 NAPEPLDQ6IQ20 393 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 FBXL19Q6PCT2 694 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 GDPD4Q6W3E5 623 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 ERMP1Q7Z2K6 904 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 ATPAF2Q8N5M1 289 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 FAM174AQ8TBP5 190 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 CINPQ9BW66 212 aaPredicted RBP13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 CALN1Q9BXU9 219 aa13.25□□□□□ -0.29
R3HDM1-213ENST00000463230 DNAAF2Q9NVR5 837 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms