RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 AP1B1Q10567 949 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 CNTN1Q12860 1018 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 SGCGQ13326 291 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 LBRQ14739 615 aaKnown RBP9.72□□□□□ -0.85
PKP4-208ENST00000462335 PDK1Q15118 436 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 CCDC6Q16204 474 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 CSRP2Q16527 193 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 DUOXA1Q1HG43 343 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 ATXN7L2Q5T6C5 722 aaPredicted RBP9.72□□□□□ -0.85
PKP4-208ENST00000462335 GDPD4Q6W3E5 623 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 ERN2Q76MJ5 926 aaKnown RBP9.72□□□□□ -0.85
PKP4-208ENST00000462335 LRRC8AQ8IWT6 810 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 PLPP6Q8IY26 295 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 NDUFAF2Q8N183 169 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 DCLK2Q8N568 766 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 RNF10Q8N5U6 811 aaKnown RBP9.72□□□□□ -0.85
PKP4-208ENST00000462335 NETO2Q8NC67 525 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 CHST14Q8NCH0 376 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 RAPGEF5Q92565 580 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 ZNF419Q96HQ0 510 aaPredicted RBP9.72□□□□□ -0.85
PKP4-208ENST00000462335 FEM1CQ96JP0 617 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 EXOC2Q96KP1 924 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 ZNF599Q96NL3 588 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 RNF157Q96PX1 679 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 NOL6Q9H6R4 1146 aaKnown RBP9.72□□□□□ -0.85
PKP4-208ENST00000462335 SCUBE2Q9NQ36 999 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 AASDHPPTQ9NRN7 309 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 SEMA4GQ9NTN9 838 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 EVLQ9UI08 416 aaPredicted RBP9.72□□□□□ -0.85
PKP4-208ENST00000462335 DUSP10Q9Y6W6 482 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 CKAP5Q14008 2032 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 FANCMQ8IYD8 2048 aa9.72□□□□□ -0.85
PKP4-208ENST00000462335 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.71□□□□□ -0.86
PKP4-208ENST00000462335 CCDC66A2RUB6 948 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 GOLGA6L9A6NEM1 432 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 METTL12A8MUP2 240 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 BCAT2O15382 392 aaPredicted RBP9.71□□□□□ -0.86
PKP4-208ENST00000462335 PJA2O43164 708 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 IGLV3-19P01714 112 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 CA4P22748 312 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 ITPKAP23677 461 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 MAOBP27338 520 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 HOXD12P35452 270 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 PTGER3P43115 390 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 MMP13P45452 471 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 NEK3P51956 506 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 RWDD2BP57060 319 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 C21orf59P57076 290 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 ARHGAP8P85298 464 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 LMNB2Q03252 620 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 STAT4Q14765 748 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 CYTH1Q15438 398 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 SETMARQ53H47 684 aaPredicted RBP9.71□□□□□ -0.86
PKP4-208ENST00000462335 ZNF805Q5CZA5 627 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 TRIM61Q5EBN2 209 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 TFDP3Q5H9I0 405 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 KIAA0895LQ68EN5 471 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 ERAP2Q6P179 960 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 NCEH1Q6PIU2 408 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 CYP4V2Q6ZWL3 525 aaPredicted RBP9.71□□□□□ -0.86
PKP4-208ENST00000462335 SRLQ86TD4 932 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 CPNE8Q86YQ8 564 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.71□□□□□ -0.86
PKP4-208ENST00000462335 EXD1Q8NHP7 514 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 PCDH19Q8TAB3 1148 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 PDCD6IPQ8WUM4 868 aaKnown RBP9.71□□□□□ -0.86
PKP4-208ENST00000462335 P3H4Q92791 437 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 KLHL32Q96NJ5 620 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 GTPBP2Q9BX10 602 aaKnown RBP9.71□□□□□ -0.86
PKP4-208ENST00000462335 LACRTQ9GZZ8 138 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 KLC2Q9H0B6 622 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 KDM4CQ9H3R0 1056 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 C6orf106Q9H6K1 298 aaPredicted RBP9.71□□□□□ -0.86
PKP4-208ENST00000462335 CD248Q9HCU0 757 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 LZTFL1Q9NQ48 299 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 ETNK2Q9NVF9 386 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 SEPT10Q9P0V9 454 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 EIF2B4Q9UI10 523 aaKnown RBP9.71□□□□□ -0.86
PKP4-208ENST00000462335 SLC6A14Q9UN76 642 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 ACTL7AQ9Y615 435 aa9.71□□□□□ -0.86
PKP4-208ENST00000462335 ZFHX2Q9C0A1 2572 aaPredicted RBP9.71□□□□□ -0.86
PKP4-208ENST00000462335 PTPRZ1P23471 2315 aaPredicted RBP9.71□□□□□ -0.86
PKP4-208ENST00000462335 CEP192Q8TEP8 1941 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 A0A1B0GTW7 788 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 C16orf96A6NNT2 1141 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 MIF4GDA9UHW6 222 aaKnown RBP9.7□□□□□ -0.86
PKP4-208ENST00000462335 ZNF487B1APH4 448 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 PLK4O00444 970 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 ZSCAN12O43309 604 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 CST8O60676 142 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 RNGTTO60942 597 aaKnown RBP9.7□□□□□ -0.86
PKP4-208ENST00000462335 TJP3O95049 919 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 ZNF806P0C7X5 589 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 CES1P23141 567 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 CCNCP24863 283 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 ITGB7P26010 798 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 MSNP26038 577 aaKnown RBP9.7□□□□□ -0.86
PKP4-208ENST00000462335 CD27P26842 260 aa9.7□□□□□ -0.86
PKP4-208ENST00000462335 MAT2AP31153 395 aaKnown RBP9.7□□□□□ -0.86
PKP4-208ENST00000462335 NUDT1P36639 197 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms