RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 LRCH4O75427 683 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 PCDH8O95206 1070 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 IGSF6O95976 241 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 GYPCP04921 128 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 SERPING1P05155 500 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 UGT2B4P06133 528 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 TPM3P06753 285 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 PRLRP16471 622 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 EPHA8P29322 1005 aaPredicted RBP10.34□□□□□ -0.75
SF3A3-204ENST00000462258 GKP32189 559 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 YBEYP58557 167 aaPredicted RBP10.34□□□□□ -0.75
SF3A3-204ENST00000462258 RHOAP61586 193 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 ZBED6P86452 979 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 STAT4Q14765 748 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 SKOR2Q2VWA4 1001 aaPredicted RBP10.34□□□□□ -0.75
SF3A3-204ENST00000462258 ATXN7L2Q5T6C5 722 aaPredicted RBP10.34□□□□□ -0.75
SF3A3-204ENST00000462258 SEL1L3Q68CR1 1132 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 KIAA1161Q6NSJ0 714 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 FBXL19Q6PCT2 694 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 DBX2Q6ZNG2 339 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 GLRX5Q86SX6 157 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 VPS36Q86VN1 386 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 IQCHQ86VS3 1027 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 PLPP6Q8IY26 295 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 UMODL1-AS1Q8N2C9 162 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 ARFGAP1Q8N6T3 406 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 MFSD2AQ8NA29 543 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 TMEM145Q8NBT3 493 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 RHBDD1Q8TEB9 315 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 CASKIN2Q8WXE0 1202 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 KLK6Q92876 244 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 LRIG1Q96JA1 1093 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 KCTD15Q96SI1 283 aaPredicted RBP10.34□□□□□ -0.75
SF3A3-204ENST00000462258 EIF3CQ99613 913 aaKnown RBP10.34□□□□□ -0.75
SF3A3-204ENST00000462258 CDC6Q99741 560 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.34□□□□□ -0.75
SF3A3-204ENST00000462258 OSBPL1AQ9BXW6 950 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 KLC2Q9H0B6 622 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 ISCUQ9H1K1 167 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 FZD3Q9NPG1 666 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 DONSONQ9NYP3 566 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 CA5BQ9Y2D0 317 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 NEUROG3Q9Y4Z2 214 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 BZW2Q9Y6E2 419 aaKnown RBP10.34□□□□□ -0.75
SF3A3-204ENST00000462258 IGF2RP11717 2491 aa10.34□□□□□ -0.75
SF3A3-204ENST00000462258 LRRK1Q38SD2 2015 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 SLC31A1O15431 190 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 MAGEC1O60732 1142 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 HNRNPA2B1P22626 353 aaKnown RBP10.33□□□□□ -0.76
SF3A3-204ENST00000462258 MIPP30301 263 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 AKT2P31751 481 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 ABL2P42684 1182 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 ARRB1P49407 418 aaPredicted RBP10.33□□□□□ -0.76
SF3A3-204ENST00000462258 NDST2P52849 883 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 OVGP1Q12889 678 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 SERINC3Q13530 473 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 SHBQ15464 509 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 ST3GAL2Q16842 350 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 ZNF284Q2VY69 593 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 TMEM259Q4ZIN3 620 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 ZNF805Q5CZA5 627 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 PPP6R3Q5H9R7 873 aaPredicted RBP10.33□□□□□ -0.76
SF3A3-204ENST00000462258 PRAMEF14Q5SWL7 426 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 ERMARDQ5T6L9 678 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 UNQ6494/PRO21346Q6UXR6 183 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 RFX8Q6ZV50 586 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 CYP4V2Q6ZWL3 525 aaPredicted RBP10.33□□□□□ -0.76
SF3A3-204ENST00000462258 RAB44Q7Z6P3 723 aaPredicted RBP10.33□□□□□ -0.76
SF3A3-204ENST00000462258 GATAD2AQ86YP4 633 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 CPLX3Q8WVH0 158 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 CELF6Q96J87 481 aaKnown RBP10.33□□□□□ -0.76
SF3A3-204ENST00000462258 EXOC2Q96KP1 924 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 NCAPGQ9BPX3 1015 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 XPO4Q9C0E2 1151 aaKnown RBP10.33□□□□□ -0.76
SF3A3-204ENST00000462258 THAP2Q9H0W7 228 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 LRRC19Q9H756 370 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 PDFQ9HBH1 243 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 UBA2Q9UBT2 640 aaPredicted RBP10.33□□□□□ -0.76
SF3A3-204ENST00000462258 FTSJ1Q9UET6 329 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 KLK13Q9UKR3 277 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 CAPN11Q9UMQ6 739 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 ZFR2Q9UPR6 939 aaKnown RBP10.33□□□□□ -0.76
SF3A3-204ENST00000462258 APOBEC2Q9Y235 224 aaKnown RBP10.33□□□□□ -0.76
SF3A3-204ENST00000462258 ITM2BQ9Y287 266 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 LUC7L2Q9Y383 392 aaKnown RBP10.33□□□□□ -0.76
SF3A3-204ENST00000462258 FADS3Q9Y5Q0 445 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 CACNA1BQ00975 2339 aa10.33□□□□□ -0.76
SF3A3-204ENST00000462258 C16orf96A6NNT2 1141 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 C1QTNF9BB2RNN3 333 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 DAPK3O43293 454 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 AP1G1O43747 822 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 ITGAVP06756 1048 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 C1QTNF9P0C862 333 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 THEGLP0DJG4 465 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 CASP14P31944 242 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 PCK1P35558 622 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 RPS21P63220 83 aaKnown RBP10.32□□□□□ -0.76
SF3A3-204ENST00000462258 RAD51Q06609 339 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 SMTNL2Q2TAL5 461 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 INO80DQ53TQ3 878 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms