RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 TM6SF2Q9BZW4 377 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 LRRC19Q9H756 370 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 CAPN10Q9HC96 672 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 OSGEPQ9NPF4 335 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 FSCN3Q9NQT6 498 aa15.2■□□□□ 0.02
ATG4B-213ENST00000460211 RCOR3Q9P2K3 495 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-213ENST00000460211 UBA2Q9UBT2 640 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-213ENST00000460211 SPAARA0A1B0GVQ0 90 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 ARHGAP33O14559 1287 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 ZNF821O75541 412 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-213ENST00000460211 LEFTY1O75610 366 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 TMCC1O94876 653 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 CD160O95971 181 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 CTSLP07711 333 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 MAN1A1P33908 653 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 CYLC1P35663 651 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-213ENST00000460211 NUDT1P36639 197 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 ARHGAP25P42331 645 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 PAPOLAP51003 745 aaKnown RBP15.19■□□□□ 0.02
ATG4B-213ENST00000460211 AFF3P51826 1226 aaKnown RBP15.19■□□□□ 0.02
ATG4B-213ENST00000460211 RHOAP61586 193 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 SLC25A11Q02978 314 aaKnown RBP15.19■□□□□ 0.02
ATG4B-213ENST00000460211 DPYSQ14117 519 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 MESDQ14696 234 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 SPA17Q15506 151 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 MYLK3Q32MK0 819 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 ZFYVE27Q5T4F4 411 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 IL27RAQ6UWB1 636 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 TMCO3Q6UWJ1 677 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 ERN2Q76MJ5 926 aaKnown RBP15.19■□□□□ 0.02
ATG4B-213ENST00000460211 POLNQ7Z5Q5 900 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 PRPF39Q86UA1 669 aaKnown RBP15.19■□□□□ 0.02
ATG4B-213ENST00000460211 MAP7D3Q8IWC1 876 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 SLC35G2Q8TBE7 412 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 GDAP1L1Q96MZ0 367 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 PANX2Q96RD6 677 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 HDAC8Q9BY41 377 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 SLC39A8Q9C0K1 460 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 ZDHHC6Q9H6R6 413 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 SP110Q9HB58 689 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 PREBQ9HCU5 417 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 ACTL7AQ9Y615 435 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 NUMA1Q14980 2115 aa15.19■□□□□ 0.02
ATG4B-213ENST00000460211 A0A1W2PPC4 97 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 TMEM8BA6NDV4 472 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 TMEM110-MUSTN1A8MSY1 372 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 DFFAO00273 331 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 KRIT1O00522 736 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 PLRG1O43660 514 aaKnown RBP15.18■□□□□ 0.02
ATG4B-213ENST00000460211 PRAMEF11O60813 436 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 IPO7O95373 1038 aaKnown RBP15.18■□□□□ 0.02
ATG4B-213ENST00000460211 IGSF6O95976 241 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 TCF4P15884 667 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 AMPD1P23109 780 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 SERPINB6P35237 376 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 PI4KAP42356 2102 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 MAGEA1P43355 309 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 METAP1P53582 386 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 CDH6P55285 790 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 PDK2Q15119 407 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 AGBL4Q5VU57 503 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 NEK5Q6P3R8 708 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 FBXL19Q6PCT2 694 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 ADAT2Q7Z6V5 191 aaKnown RBP15.18■□□□□ 0.02
ATG4B-213ENST00000460211 KCTD6Q8NC69 237 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 RFFLQ8WZ73 363 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 FAM131CQ96AQ9 280 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 CSPG4P5Q96PW8 444 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 OSBPL1AQ9BXW6 950 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 KLC2Q9H0B6 622 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 SLC32A1Q9H598 525 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 PCDH18Q9HCL0 1135 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 KLK13Q9UKR3 277 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 WASF2Q9Y6W5 498 aa15.18■□□□□ 0.02
ATG4B-213ENST00000460211 PLK4O00444 970 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 OPHN1O60890 802 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 PALMO75781 387 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 IGHV4-34P06331 123 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 ITGB7P26010 798 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 GJC1P36383 396 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 NEK3P51956 506 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 RACK1P63244 317 aaKnown RBP15.17■□□□□ 0.02
ATG4B-213ENST00000460211 SIM1P81133 766 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-213ENST00000460211 IL10RBQ08334 325 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 RFTN1Q14699 578 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-213ENST00000460211 SLC45A4Q5BKX6 768 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 AFMIDQ63HM1 303 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 TXNRD3NBQ6F5E7 133 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 TMTC1Q8IUR5 882 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 NSMCE1Q8WV22 266 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 ARRDC3Q96B67 414 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 CALN1Q9BXU9 219 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 TM9SF3Q9HD45 589 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 IPO11Q9UI26 975 aaKnown RBP15.17■□□□□ 0.02
ATG4B-213ENST00000460211 CEP192Q8TEP8 1941 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 PKD1L2Q7Z442 2459 aa15.17■□□□□ 0.02
ATG4B-213ENST00000460211 DSPP15924 2871 aaKnown RBP15.16■□□□□ 0.02
ATG4B-213ENST00000460211 GOLGA6L6A8MZA4 724 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 J3KR12 359 aa15.16■□□□□ 0.02
ATG4B-213ENST00000460211 MTA2O94776 668 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms