RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 AGAP11Q8TF27 550 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 SPATA31A5Q5VU36 1347 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 SPATA31A7Q8IWB4 1347 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 BTN3A3O00478 584 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 FFAR2O15552 330 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 TRUB2O95900 331 aaKnown RBP19.85■□□□□ 0.77
SNX27-204ENST00000458013 COX4I1P13073 169 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 RETSATQ6NUM9 610 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 OR4A15Q8NGL6 344 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 RAD51AP1Q96B01 352 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 KAZALD1Q96I82 304 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 NPAS2Q99743 824 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 CNTNAP4Q9C0A0 1308 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 ACSL4O60488 711 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 GOT1P17174 413 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 ARHGAP22Q7Z5H3 698 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 CREG2Q8IUH2 290 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 C10orf107Q8IVU9 208 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 CDYL2Q8N8U2 506 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 CDK5RAP1Q96SZ6 601 aaKnown RBP19.85■□□□□ 0.77
SNX27-204ENST00000458013 TBCBQ99426 244 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 POLR1EQ9GZS1 481 aaKnown RBP19.85■□□□□ 0.77
SNX27-204ENST00000458013 NCKAP1Q9Y2A7 1128 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 CAMSAP1Q5T5Y3 1602 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 LRRC14BA6NHZ5 514 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 HIST1H2ABP04908 130 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 ACVR2BQ13705 512 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 XKR6Q5GH73 641 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 HIST3H2AQ7L7L0 130 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 HIST1H2ACQ93077 130 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 E9PCH4 1651 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 E7ENQ6 273 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 LTA4HP09960 611 aaKnown RBP19.84■□□□□ 0.77
SNX27-204ENST00000458013 ACSM2AQ08AH3 577 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 ACSM2BQ68CK6 577 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 MOXD1Q6UVY6 613 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 LNX1Q8TBB1 728 aaPredicted RBP19.84■□□□□ 0.77
SNX27-204ENST00000458013 SENP8Q96LD8 212 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 MRPL17Q9NRX2 175 aaKnown RBP19.84■□□□□ 0.77
SNX27-204ENST00000458013 NDUFA13Q9P0J0 144 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 KRT33AO76009 404 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 ALADP13716 330 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 FSCN1Q16658 493 aaKnown RBP19.84■□□□□ 0.77
SNX27-204ENST00000458013 GPR107Q5VW38 600 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 SPESP1Q6UW49 350 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 PSTKQ8IV42 348 aaKnown RBP19.84■□□□□ 0.77
SNX27-204ENST00000458013 EPB41L4BQ9H329 900 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 FOXO6A8MYZ6 492 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 AMD1P17707 334 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 PTPN1P18031 435 aaKnown RBP19.84■□□□□ 0.77
SNX27-204ENST00000458013 HPS6Q86YV9 775 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 MCUBQ9NWR8 336 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 TRHDEQ9UKU6 1024 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 ANGPT4Q9Y264 503 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 GMPPBQ9Y5P6 360 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 RFX4Q33E94 735 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 HELQQ8TDG4 1101 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 NDRG1Q92597 394 aaKnown RBP19.84■□□□□ 0.77
SNX27-204ENST00000458013 MARCH2Q9P0N8 246 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 JCADQ9P266 1359 aa19.84■□□□□ 0.77
SNX27-204ENST00000458013 CYP2A13Q16696 494 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 SETD9Q8NE22 299 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 FUCA2Q9BTY2 467 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 PTGFRNQ9P2B2 879 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 SCAMP1O15126 338 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 KIAA0319LQ8IZA0 1049 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 CFAP52Q8N1V2 620 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 ZFRQ96KR1 1074 aaKnown RBP19.83■□□□□ 0.77
SNX27-204ENST00000458013 ZNF184Q99676 751 aaPredicted RBP19.83■□□□□ 0.77
SNX27-204ENST00000458013 GSAPA4D1B5 854 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 A8MUI8 341 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 AP3D1O14617 1153 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 AMHP03971 560 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 DGKAP23743 735 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 CXCL9Q07325 125 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 CRTC3Q6UUV7 619 aa19.83■□□□□ 0.77
SNX27-204ENST00000458013 PLOD3O60568 738 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 PIK3CGP48736 1102 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 CHN2P52757 468 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 CCL23P55773 120 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 USP46P62068 366 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 SFSWAPQ12872 951 aaKnown RBP19.83■□□□□ 0.76
SNX27-204ENST00000458013 FAM151BQ6UXP7 276 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 DNERQ8NFT8 737 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 POLR3HQ9Y535 204 aaPredicted RBP19.83■□□□□ 0.76
SNX27-204ENST00000458013 U3KQV3 271 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 NPEPPSL1A6NEC2 478 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 ENTPD5O75356 428 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 FAM155BO75949 473 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 PGBD2Q6P3X8 592 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 VANGL1Q8TAA9 524 aaPredicted RBP19.83■□□□□ 0.76
SNX27-204ENST00000458013 SLC47A1Q96FL8 570 aa19.83■□□□□ 0.76
SNX27-204ENST00000458013 QKIQ96PU8 341 aaKnown RBP eCLIP19.83■□□□□ 0.76
SNX27-204ENST00000458013 OR10H2O60403 315 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 CST1P01037 141 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 NAGLUP54802 743 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 FIGNQ5HY92 759 aa19.82■□□□□ 0.76
SNX27-204ENST00000458013 SAMD4BQ5PRF9 694 aaKnown RBP19.82■□□□□ 0.76
SNX27-204ENST00000458013 SCAIQ8N9R8 606 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms