RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 SYN2Q92777 582 aaPredicted RBP13.18□□□□□ -0.3
TREX1-203ENST00000456089 KLHDC7BQ96G42 594 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 LRIG1Q96JA1 1093 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 CCDC114Q96M63 670 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 DCBLD2Q96PD2 775 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 CNPY3Q9BT09 278 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 CALN1Q9BXU9 219 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 XPO4Q9C0E2 1151 aaKnown RBP13.18□□□□□ -0.3
TREX1-203ENST00000456089 OSBPL2Q9H1P3 480 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 ERVMER34-1Q9H9K5 563 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 PREBQ9HCU5 417 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 ATP13A1Q9HD20 1204 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 UCKL1Q9NWZ5 548 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 TAS2R14Q9NYV8 317 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 PPARGC1AQ9UBK2 798 aaKnown RBP13.18□□□□□ -0.3
TREX1-203ENST00000456089 IL36AQ9UHA7 158 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 CAPN11Q9UMQ6 739 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 DMTF1Q9Y222 760 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 FCF1Q9Y324 198 aaKnown RBP13.18□□□□□ -0.3
TREX1-203ENST00000456089 SCINQ9Y6U3 715 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 WASF2Q9Y6W5 498 aa13.18□□□□□ -0.3
TREX1-203ENST00000456089 FAM72CH0Y354 149 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 YKT6O15498 198 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 FFAR2O15552 330 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 CCP110O43303 1012 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 ZMPSTE24O75844 475 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 RNF8O76064 485 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 SERPING1P05155 500 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 PLEKP08567 350 aaPredicted RBP13.17□□□□□ -0.3
TREX1-203ENST00000456089 JUPP14923 745 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 PSMA2P25787 234 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 ETFBP38117 255 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 RXRGP48443 463 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 HDAC4P56524 1084 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 ARF5P84085 180 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 TARDBPQ13148 414 aaKnown RBP eCLIP13.17□□□□□ -0.3
TREX1-203ENST00000456089 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
TREX1-203ENST00000456089 MAMLD1Q13495 774 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 ZNF542PQ5EBM4 170 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 HES3Q5TGS1 186 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 FAM72AQ5TYM5 149 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 FAM72DQ6L9T8 149 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 ZNF783Q6ZMS7 281 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 ERN2Q76MJ5 926 aaKnown RBP13.17□□□□□ -0.3
TREX1-203ENST00000456089 TMC6Q7Z403 805 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 PDZD3Q86UT5 571 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 HORMAD1Q86X24 394 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 FAM72BQ86X60 149 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 SLC25A45Q8N413 288 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
TREX1-203ENST00000456089 TMEM145Q8NBT3 493 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 NETO2Q8NC67 525 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 RNF214Q8ND24 703 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 TMIEQ8NEW7 156 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 TSC1Q92574 1164 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 NTAN1Q96AB6 310 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 ZNF653Q96CK0 615 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 TBC1D31Q96DN5 1066 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 SYT11Q9BT88 431 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 TM6SF2Q9BZW4 377 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 RETREG1Q9H6L5 497 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
TREX1-203ENST00000456089 DYRK4Q9NR20 520 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 MYO1AQ9UBC5 1043 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 CNOT8Q9UFF9 292 aaKnown RBP13.17□□□□□ -0.3
TREX1-203ENST00000456089 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 HPCAL4Q9UM19 191 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 IGSF10Q6WRI0 2623 aa13.17□□□□□ -0.3
TREX1-203ENST00000456089 ILVBLA1L0T0 632 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 DDX3XO00571 662 aaKnown RBP eCLIP13.16□□□□□ -0.3
TREX1-203ENST00000456089 ATMINO43313 823 aaPredicted RBP13.16□□□□□ -0.3
TREX1-203ENST00000456089 SIGLEC6O43699 453 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 CD160O95971 181 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 PRNPP04156 253 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 PBX1P40424 430 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 RECQLP46063 649 aaPredicted RBP13.16□□□□□ -0.3
TREX1-203ENST00000456089 SERPINH1P50454 418 aaKnown RBP13.16□□□□□ -0.3
TREX1-203ENST00000456089 AIF1P55008 147 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 NRG1Q02297 640 aaPredicted RBP13.16□□□□□ -0.3
TREX1-203ENST00000456089 GNA12Q03113 381 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 TRIM14Q14142 442 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 FGL2Q14314 439 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 RETSATQ6NUM9 610 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 FBXL19Q6PCT2 694 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 GCNT7Q6ZNI0 430 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 IQCHQ86VS3 1027 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 TMPRSS12Q86WS5 348 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 ZNF354CQ86Y25 554 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 SLC22A18ASQ8N1D0 253 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 OXR1Q8N573 874 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 CCDC185Q8N715 623 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 EPAS1Q99814 870 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 ZDHHC6Q9H6R6 413 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 ZNHIT6Q9NWK9 470 aaKnown RBP13.16□□□□□ -0.3
TREX1-203ENST00000456089 GGT7Q9UJ14 662 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 TPX2Q9ULW0 747 aaKnown RBP13.16□□□□□ -0.3
TREX1-203ENST00000456089 PCDHGA1Q9Y5H4 931 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 BAHCC1Q9P281 2608 aa13.16□□□□□ -0.3
TREX1-203ENST00000456089 TCRBV5S1A1TA0A578 114 aa13.15□□□□□ -0.3
TREX1-203ENST00000456089 RAD51BO15315 384 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms