RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 NXNL1Q96CM4 212 aa17.93■□□□□ 0.46
PTPN6-204ENST00000456013 TMA16Q96EY4 203 aaKnown RBP17.93■□□□□ 0.46
PTPN6-204ENST00000456013 SLC2A11Q9BYW1 496 aa17.93■□□□□ 0.46
PTPN6-204ENST00000456013 PADI4Q9UM07 663 aa17.93■□□□□ 0.46
PTPN6-204ENST00000456013 CCDC78A2IDD5 438 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 RRN3P2A6NIE6 340 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 SDHDO14521 159 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 CACNG3O60359 315 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 RNASEH2AO75792 299 aaKnown RBP17.92■□□□□ 0.46
PTPN6-204ENST00000456013 MMP3P08254 477 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 HOXD8P13378 290 aaPredicted RBP17.92■□□□□ 0.46
PTPN6-204ENST00000456013 PSMD8P48556 350 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 PPIL2Q13356 520 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 PTK2BQ14289 1009 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 PCID2Q5JVF3 399 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 PKN3Q6P5Z2 889 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 GALNT4Q8N4A0 578 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 CEP70Q8NHQ1 597 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 ASB9Q96DX5 294 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 PRPF18Q99633 342 aaKnown RBP17.92■□□□□ 0.46
PTPN6-204ENST00000456013 GRIP2Q9C0E4 1043 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.92■□□□□ 0.46
PTPN6-204ENST00000456013 EPS15L1Q9UBC2 864 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 TMCO1Q9UM00 188 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 DMTF1Q9Y222 760 aa17.92■□□□□ 0.46
PTPN6-204ENST00000456013 BTBD19C9JJ37 291 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 FAM200BP0CF97 657 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 STMN1P16949 149 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 YBX3P16989 372 aaKnown RBP eCLIP17.91■□□□□ 0.46
PTPN6-204ENST00000456013 ATXN3P54252 364 aaPredicted RBP17.91■□□□□ 0.46
PTPN6-204ENST00000456013 MYLK3Q32MK0 819 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 TMEM259Q4ZIN3 620 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 IYDQ6PHW0 289 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 ISLR2Q6UXK2 745 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 FASTKD5Q7L8L6 764 aaKnown RBP17.91■□□□□ 0.46
PTPN6-204ENST00000456013 CEP97Q8IW35 865 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 ALDH16A1Q8IZ83 802 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 PELI3Q8N2H9 469 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 CCNYL1Q8N7R7 359 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 MRPL46Q9H2W6 279 aaKnown RBP17.91■□□□□ 0.46
PTPN6-204ENST00000456013 DDIT4Q9NX09 232 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 NCKIPSDQ9NZQ3 722 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 MYLKQ15746 1914 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 FAM95CA0A1B0GW59 222 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 NCAM1P13591 858 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 ATP6V1B1P15313 513 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 SH2D4BQ5SQS7 431 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 OTOP3Q7RTS5 596 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 PIWIL4Q7Z3Z4 852 aaKnown RBP17.91■□□□□ 0.46
PTPN6-204ENST00000456013 DEFB132Q7Z7B7 95 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 SULF1Q8IWU6 871 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 ZFP28Q8NHY6 868 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 TSGA13Q96PP4 275 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 COLEC11Q9BWP8 271 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 MRPL1Q9BYD6 325 aaKnown RBP17.91■□□□□ 0.46
PTPN6-204ENST00000456013 SENP6Q9GZR1 1112 aaPredicted RBP17.91■□□□□ 0.46
PTPN6-204ENST00000456013 MRPL40Q9NQ50 206 aaKnown RBP17.91■□□□□ 0.46
PTPN6-204ENST00000456013 CNGB3Q9NQW8 809 aa17.91■□□□□ 0.46
PTPN6-204ENST00000456013 SUCOQ9UBS9 1254 aaKnown RBP17.91■□□□□ 0.46
PTPN6-204ENST00000456013 TMEM233B4DJY2 109 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 H0YJX3 145 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 GABRDO14764 452 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 FAM163BP0C2L3 166 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 ZNF26P17031 533 aaPredicted RBP17.9■□□□□ 0.46
PTPN6-204ENST00000456013 MPP1Q00013 466 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 ZNF460Q14592 562 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 KIAA0319Q5VV43 1072 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 BORAQ6PGQ7 559 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 MFSD6LQ8IWD5 586 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 DENND6AQ8IWF6 608 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 DCPSQ96C86 337 aaKnown RBP17.9■□□□□ 0.46
PTPN6-204ENST00000456013 MRGBPQ9NV56 204 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 RRN3Q9NYV6 651 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 OR12D3Q9UGF7 316 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 PHF24Q9UPV7 400 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 PIN4Q9Y237 131 aaKnown RBP17.9■□□□□ 0.46
PTPN6-204ENST00000456013 AAR2Q9Y312 384 aaKnown RBP17.9■□□□□ 0.46
PTPN6-204ENST00000456013 PCDHGA7Q9Y5G6 932 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 SNX10Q9Y5X0 201 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 F9P00740 461 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 C8BP07358 591 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 TCN1P20061 433 aaPredicted RBP17.9■□□□□ 0.46
PTPN6-204ENST00000456013 NR1H2P55055 460 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 DNAJB13P59910 316 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 PSME3P61289 254 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 ZNF33AQ06730 810 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 CTBP1Q13363 440 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 TRIM25Q14258 630 aaKnown RBP17.9■□□□□ 0.46
PTPN6-204ENST00000456013 ADRM1Q16186 407 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 DGKDQ16760 1214 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 IL23RQ5VWK5 629 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 WSCD1Q658N2 575 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 GK5Q6ZS86 529 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 CHSY3Q70JA7 882 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 EGFL6Q8IUX8 553 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 FAM156AQ8NDB6 213 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 FAM81AQ8TBF8 368 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 RNF217Q8TC41 542 aa17.9■□□□□ 0.46
PTPN6-204ENST00000456013 TOP1MTQ969P6 601 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms