RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ENGASEQ8NFI3 743 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 NUDT12Q9BQG2 462 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 AGXT2Q9BYV1 514 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 MLXIPLQ9NP71 852 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 HCN3Q9P1Z3 774 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 NXF1Q9UBU9 619 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 COL5A2P05997 1499 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SH3D21A4FU49 640 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 E9PBE3 544 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 HBP1O60381 514 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 POU1F1P28069 291 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 RASGEF1BQ0VAM2 473 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 TBCELQ5QJ74 424 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 FKBP1CQ5VVH2 108 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ADGRD2Q7Z7M1 963 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 TMEM17Q86X19 198 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CFAP206Q8IYR0 622 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 TMEM86AQ8N2M4 240 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 MEIOBQ8N635 442 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SH3RF3Q8TEJ3 882 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PEX13Q92968 403 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 MYO19Q96H55 970 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PCBD2Q9H0N5 130 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 TMEM168Q9H0V1 697 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CMTM6Q9NX76 183 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CALML5Q9NZT1 146 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 C2CD2Q9Y426 696 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 DHRS12A0PJE2 317 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ZMYND10O75800 440 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ITGA2BP08514 1039 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TLX1P31314 330 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 CLCN5P51795 746 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TWF2Q6IBS0 349 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 CERS6Q6ZMG9 384 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SUN5Q8TC36 379 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SLCO2A1Q92959 643 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 AIF1LQ9BQI0 150 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ANKRA2Q9H9E1 313 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 MLXQ9UH92 298 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 GINS2Q9Y248 185 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 C1orf232A0A0U1RR37 186 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 RNH1P13489 461 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ATP5F1P24539 256 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 CHI3L1P36222 383 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SLC1A2P43004 574 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 MAGEA2P43356 314 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 RETSATQ6NUM9 610 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 HHIPL2Q6UWX4 724 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ITIH5Q86UX2 942 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 GPKOWQ92917 476 aaPredicted RBP eCLIP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TTYH1Q9H313 450 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 EVA1AQ9H8M9 152 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 GPATCH2Q9NW75 528 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 MALT1Q9UDY8 824 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 GNEQ9Y223 722 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TDRKHQ9Y2W6 561 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 FAM205AQ6ZU69 1335 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 KLHL33A6NCF5 533 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 C2orf74A8MZ97 194 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TULP2O00295 520 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TRIM66O15016 1216 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SCGB2A1O75556 95 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 OXSR1O95747 527 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 AQP5P55064 265 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 FASTKQ14296 549 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 LACTB2Q53H82 288 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 LIPMQ5VYY2 423 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 BPIFB6Q8NFQ5 453 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 FAM120BQ96EK7 910 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 DNAJC28Q9NX36 388 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 AGAP1Q9UPQ3 857 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 MRPS33Q9Y291 106 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TADA2AO75478 443 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 KRT36O76013 467 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 VMACQ2NL98 169 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 RBM48Q5RL73 367 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TRPM4Q8TD43 1214 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SLC39A3Q9BRY0 314 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 HPSEQ9Y251 543 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF510Q9Y2H8 683 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SHPRHQ149N8 1683 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 A0A087WZ62 844 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SNX3O60493 162 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 PROSCO94903 275 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SNRPB2P08579 225 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 SLC2A4P14672 509 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 LBPP18428 481 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 AMPD1P23109 780 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 NR4A2P43354 598 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ARFIP1P53367 373 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 TXNRD1Q16881 649 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ATXN7L2Q5T6C5 722 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ERI1Q8IV48 349 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 EMC1Q8N766 993 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 COA7Q96BR5 231 aa5.26□□□□□ -1.57
CSMD3-204ENST00000455883 EIF2AK1Q9BQI3 630 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 CDC42EP4Q9H3Q1 356 aaKnown RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF624Q9P2J8 865 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-204ENST00000455883 ENTPD4Q9Y227 616 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms