RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 TPCN2Q8NHX9 752 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 PCDH19Q8TAB3 1148 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 FAM71BQ8TC56 605 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 RAPGEF5Q92565 580 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 TCEAL3Q969E4 200 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 ISG20Q96AZ6 181 aaKnown RBP7.18□□□□□ -1.26
COMMD1-205ENST00000455659 CALR3Q96L12 384 aaKnown RBP7.18□□□□□ -1.26
COMMD1-205ENST00000455659 FAM129BQ96TA1 746 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 HEPHQ9BQS7 1158 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 OSBPL1AQ9BXW6 950 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 TSGA10Q9BZW7 698 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 MIR1-1HGQ9H1L0 117 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 PCED1AQ9H1Q7 454 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 C6orf106Q9H6K1 298 aaPredicted RBP7.18□□□□□ -1.26
COMMD1-205ENST00000455659 VPS45Q9NRW7 570 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 SEMA4GQ9NTN9 838 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 DDX56Q9NY93 547 aaKnown RBP7.18□□□□□ -1.26
COMMD1-205ENST00000455659 HECAQ9UBI9 543 aaPredicted RBP7.18□□□□□ -1.26
COMMD1-205ENST00000455659 LHX3Q9UBR4 397 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 TRIM10Q9UDY6 481 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 SEPT3Q9UH03 358 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 IPO11Q9UI26 975 aaKnown RBP7.18□□□□□ -1.26
COMMD1-205ENST00000455659 SALL4Q9UJQ4 1053 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 SARDHQ9UL12 918 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 TTLL3Q9Y4R7 772 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 WASF2Q9Y6W5 498 aa7.18□□□□□ -1.26
COMMD1-205ENST00000455659 SPEGQ15772 3267 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 NCOR2Q9Y618 2525 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 LNP1A1A4G5 178 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 GRID2IPA4D2P6 1211 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 APOL1O14791 398 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 PJA2O43164 708 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 PLRG1O43660 514 aaKnown RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 FSBPO95073 299 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 PIGNO95427 931 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 GNSP15586 552 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 MX2P20592 715 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 IL4RP24394 825 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 CTNNA1P35221 906 aaKnown RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 GARSP41250 739 aaKnown RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 GBE1Q04446 702 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 IL10RBQ08334 325 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 GALNT2Q10471 571 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 CNTN1Q12860 1018 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 RFTN1Q14699 578 aaPredicted RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 PAFAH1B3Q15102 231 aaKnown RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 SF3A2Q15428 464 aaKnown RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 CSRP2Q16527 193 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 IFI16Q16666 785 aaKnown RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 TRIM61Q5EBN2 209 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 ARSIQ5FYB1 569 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 PLA2G2CQ5R387 149 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 PIP5KL1Q5T9C9 394 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 PEAR1Q5VY43 1037 aaPredicted RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 KIAA0895LQ68EN5 471 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 ERN2Q76MJ5 926 aaKnown RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 RFX6Q8HWS3 928 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 SYT12Q8IV01 421 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 KATNAL2Q8IYT4 538 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 BBS5Q8N3I7 341 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 GPR161Q8N6U8 529 aaKnown RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 PQLC3Q8N755 202 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 PAF1Q8N7H5 531 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 CADM4Q8NFZ8 388 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 OR2T34Q8NGX1 318 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 NSMCE1Q8WV22 266 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 ANP32BQ92688 251 aaKnown RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 KRT35Q92764 455 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 FAM131CQ96AQ9 280 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 ARRDC3Q96B67 414 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 HDAC11Q96DB2 347 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 RBM41Q96IZ5 413 aaKnown RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 ZNF599Q96NL3 588 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 EDEM2Q9BV94 578 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 LACRTQ9GZZ8 138 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 NEUROG2Q9H2A3 272 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 PREBQ9HCU5 417 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 SUSD2Q9UGT4 822 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 EVLQ9UI08 416 aaPredicted RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 PILRBQ9UKJ0 227 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 PPM1HQ9ULR3 514 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.17□□□□□ -1.26
COMMD1-205ENST00000455659 CAPN6Q9Y6Q1 641 aa7.17□□□□□ -1.26
COMMD1-205ENST00000455659 A0A0U1RQJ8 604 aa7.16□□□□□ -1.26
COMMD1-205ENST00000455659 C3orf70A6NLC5 250 aaPredicted RBP7.16□□□□□ -1.26
COMMD1-205ENST00000455659 PATE3B3GLJ2 98 aa7.16□□□□□ -1.26
COMMD1-205ENST00000455659 RNF103O00237 685 aa7.16□□□□□ -1.26
COMMD1-205ENST00000455659 PPP1R12AO14974 1030 aaPredicted RBP7.16□□□□□ -1.26
COMMD1-205ENST00000455659 KHNYNO15037 678 aaKnown RBP7.16□□□□□ -1.26
COMMD1-205ENST00000455659 FOXD2O60548 495 aaPredicted RBP7.16□□□□□ -1.26
COMMD1-205ENST00000455659 NEBLO76041 1014 aa7.16□□□□□ -1.26
COMMD1-205ENST00000455659 IGHV4-34P06331 123 aa7.16□□□□□ -1.26
COMMD1-205ENST00000455659 PTMAP06454 111 aaKnown RBP7.16□□□□□ -1.26
COMMD1-205ENST00000455659 CCDC175P0C221 793 aa7.16□□□□□ -1.26
COMMD1-205ENST00000455659 ADRB3P13945 408 aa7.16□□□□□ -1.26
COMMD1-205ENST00000455659 ZFXP17010 805 aaPredicted RBP7.16□□□□□ -1.26
COMMD1-205ENST00000455659 KDELR1P24390 212 aa7.16□□□□□ -1.26
COMMD1-205ENST00000455659 SERPINA4P29622 427 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms