RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 RAD51CO43502 376 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 NFKB1P19838 968 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 DR1Q01658 176 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 ITKQ08881 620 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 P3H1Q32P28 736 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 ALG1LQ6GMV1 187 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 TMEM92Q6UXU6 159 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 METTL3Q86U44 580 aaKnown RBP10.89□□□□□ -0.67
SYPL1-202ENST00000455385 PRPF39Q86UA1 669 aaKnown RBP10.89□□□□□ -0.67
SYPL1-202ENST00000455385 PLPP6Q8IY26 295 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 MMGT1Q8N4V1 131 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 FLCNQ8NFG4 579 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 OR2AP1Q8NGE2 309 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 SPATA22Q8NHS9 363 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 CLDN23Q96B33 292 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 FAM129BQ96TA1 746 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 GABRG3Q99928 467 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 SEMA3CQ99985 751 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 NOD2Q9HC29 1040 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 FEZ2Q9UHY8 353 aaPredicted RBP10.89□□□□□ -0.67
SYPL1-202ENST00000455385 EVLQ9UI08 416 aaPredicted RBP10.89□□□□□ -0.67
SYPL1-202ENST00000455385 OPHN1O60890 802 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 NEBLO76041 1014 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 ECEL1O95672 775 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 GSRP00390 522 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 DCNP07585 359 aaKnown RBP10.89□□□□□ -0.67
SYPL1-202ENST00000455385 CTSLP07711 333 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 COL9A1P20849 921 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 CCNHP51946 323 aaPredicted RBP10.89□□□□□ -0.67
SYPL1-202ENST00000455385 LMNB2Q03252 620 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 MYLK3Q32MK0 819 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 CWF19L1Q69YN2 538 aaKnown RBP10.89□□□□□ -0.67
SYPL1-202ENST00000455385 SRLQ86TD4 932 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 STK40Q8N2I9 435 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 SYNPOQ8N3V7 929 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 CCDC89Q8N998 374 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 IMP4Q96G21 291 aaKnown RBP10.89□□□□□ -0.67
SYPL1-202ENST00000455385 OXNAD1Q96HP4 312 aaPredicted RBP10.89□□□□□ -0.67
SYPL1-202ENST00000455385 NUDCD1Q96RS6 583 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 HINFPQ9BQA5 517 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 FERMT1Q9BQL6 677 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 TRIM51Q9BSJ1 452 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 LRRC1Q9BTT6 524 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 OSBPL6Q9BZF3 934 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 POLR1EQ9GZS1 481 aaKnown RBP10.89□□□□□ -0.67
SYPL1-202ENST00000455385 SUN2Q9UH99 717 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 SIT1Q9Y3P8 196 aa10.89□□□□□ -0.67
SYPL1-202ENST00000455385 CKAP5Q14008 2032 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 EDDM13A0A1B0GTR0 161 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 TARSL2A2RTX5 802 aaKnown RBP10.88□□□□□ -0.67
SYPL1-202ENST00000455385 TMEM221A6NGB7 291 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 M0R296 226 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 STK10O94804 968 aaKnown RBP10.88□□□□□ -0.67
SYPL1-202ENST00000455385 MT-CYBP00156 380 aaPredicted RBP10.88□□□□□ -0.67
SYPL1-202ENST00000455385 ALADP13716 330 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 IVDP26440 423 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 PSMB4P28070 264 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 HSPA9P38646 679 aaKnown RBP10.88□□□□□ -0.67
SYPL1-202ENST00000455385 CSNK1DP48730 415 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 VPS41P49754 854 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 SNRPD1P62314 119 aaKnown RBP10.88□□□□□ -0.67
SYPL1-202ENST00000455385 SKOR1P84550 965 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 CAMK2GQ13555 558 aaPredicted RBP10.88□□□□□ -0.67
SYPL1-202ENST00000455385 LRRC32Q14392 662 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 FAXCQ5TGI0 409 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 NCEH1Q6PIU2 408 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 JAMLQ86YT9 394 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 BBS5Q8N3I7 341 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 RYBPQ8N488 228 aaPredicted RBP10.88□□□□□ -0.67
SYPL1-202ENST00000455385 GRK7Q8WTQ7 553 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 TADA1Q96BN2 335 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 FCRL5Q96RD9 977 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 RBM15Q96T37 977 aaKnown RBP eCLIP10.88□□□□□ -0.67
SYPL1-202ENST00000455385 SLC25A51Q9H1U9 297 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 GBA3Q9H227 469 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 ETNK1Q9HBU6 452 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 PCDH9Q9HC56 1237 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 UBP1Q9NZI7 540 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 DLGAP2Q9P1A6 1054 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 RSPH14Q9UHP6 348 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 SARDHQ9UL12 918 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 SLC8A2Q9UPR5 921 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 WASF2Q9Y6W5 498 aa10.88□□□□□ -0.67
SYPL1-202ENST00000455385 CHURC1-FNTBB4DL54 471 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 POP4O95707 220 aaKnown RBP10.87□□□□□ -0.67
SYPL1-202ENST00000455385 IGSF6O95976 241 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 HOXB2P14652 356 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 CD86P42081 329 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 SLC7A5Q01650 507 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 DHX34Q14147 1143 aaKnown RBP10.87□□□□□ -0.67
SYPL1-202ENST00000455385 PPP1R7Q15435 360 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 PARP6Q2NL67 630 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 SDE2Q6IQ49 451 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 ARHGEF18Q6ZSZ5 1173 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 GDAP1L1Q96MZ0 367 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 MFSD1Q9H3U5 465 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 EPHX3Q9H6B9 360 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 SCUBE2Q9NQ36 999 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 MMP17Q9ULZ9 603 aa10.87□□□□□ -0.67
SYPL1-202ENST00000455385 PCDHGC4Q9Y5F7 938 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms