RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 INO80DQ53TQ3 878 aaPredicted RBP16.96■□□□□ 0.31
PDXDC1-204ENST00000455313 PITRM1Q5JRX3 1037 aa16.96■□□□□ 0.31
PDXDC1-204ENST00000455313 TANGO2Q6ICL3 276 aa16.96■□□□□ 0.31
PDXDC1-204ENST00000455313 LINC00523Q86TU6 105 aa16.96■□□□□ 0.31
PDXDC1-204ENST00000455313 PALM2Q8IXS6 379 aa16.96■□□□□ 0.31
PDXDC1-204ENST00000455313 MICALL1Q8N3F8 863 aa16.96■□□□□ 0.31
PDXDC1-204ENST00000455313 TADA1Q96BN2 335 aa16.96■□□□□ 0.31
PDXDC1-204ENST00000455313 FAM161BQ96MY7 647 aa16.96■□□□□ 0.31
PDXDC1-204ENST00000455313 FICDQ9BVA6 458 aa16.96■□□□□ 0.31
PDXDC1-204ENST00000455313 POMKQ9H5K3 350 aa16.96■□□□□ 0.31
PDXDC1-204ENST00000455313 ZFP14Q9HCL3 533 aa16.96■□□□□ 0.31
PDXDC1-204ENST00000455313 ZC3H7BQ9UGR2 993 aaKnown RBP16.96■□□□□ 0.31
PDXDC1-204ENST00000455313 MT-CO1P00395 513 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 AGTP01019 485 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 WNT3AP56704 352 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 SKOR1P84550 965 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 CDH17Q12864 832 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 PCSK7Q16549 785 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 FUT11Q495W5 492 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 RETSATQ6NUM9 610 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 ZNF557Q8N988 423 aaPredicted RBP16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 EBNA1BP2Q99848 306 aaKnown RBP16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 TRIM56Q9BRZ2 755 aaKnown RBP16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 PLAC1Q9HBJ0 212 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 SYBUQ9NX95 663 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 GGA2Q9UJY4 613 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 ADAM21Q9UKJ8 722 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 A0A087WUV0 522 aaPredicted RBP16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 SDR42E2A6NKP2 422 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 ADH1CP00326 375 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 ADH5P11766 374 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 ARSAP15289 507 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 CR2P20023 1033 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 GBP2P32456 591 aaPredicted RBP16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 CASC4Q6P4E1 433 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 VITQ6UXI7 678 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 C3orf62Q6ZUJ4 267 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 KDELC2Q7Z4H8 507 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 NAT16Q8N8M0 369 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 SMRP1Q8NCR6 262 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 CFAP36Q96G28 342 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 EBF3Q9H4W6 596 aa16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 FCF1Q9Y324 198 aaKnown RBP16.95■□□□□ 0.3
PDXDC1-204ENST00000455313 MYLKQ15746 1914 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 COL4A3Q01955 1670 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 HOXC11O43248 304 aaPredicted RBP16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 OPA1O60313 960 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 PABPC1P11940 636 aaKnown RBP16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 PHBP35232 272 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 MTHFRP42898 656 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 SERPINH1P50454 418 aaKnown RBP16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 KRT71Q3SY84 523 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 DENND5AQ6IQ26 1287 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 RANBP10Q6VN20 620 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 RNF135Q8IUD6 432 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 GOLGA6L1Q8N7Z2 621 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 EPS8L3Q8TE67 593 aaKnown RBP16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 ARL8AQ96BM9 186 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 STAMBPL1Q96FJ0 436 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 FAM83CQ9BQN1 747 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 LHX3Q9UBR4 397 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 ANKRD36A6QL64 1941 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 K7ERQ8 282 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 TRIM24O15164 1050 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 NFATC1O95644 943 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 LAMP2P13473 410 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 TSHRP16473 764 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 CHRNA4P43681 627 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 GEMIN4P57678 1058 aaKnown RBP16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 FCHO2Q0JRZ9 810 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 CERCAMQ5T4B2 595 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 ATP2A3Q93084 1043 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 SLC2A11Q9BYW1 496 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 NOD2Q9HC29 1040 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 BFARQ9NZS9 450 aa16.94■□□□□ 0.3
PDXDC1-204ENST00000455313 OTOL1A6NHN0 477 aaPredicted RBP16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 SMIM23A6NLE4 172 aa16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 SMAD6O43541 496 aaKnown RBP16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 SPAG6O75602 509 aa16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 SERPINF2P08697 491 aa16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 MYZAPP0CAP1 466 aa16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 CTSOP43234 321 aaPredicted RBP16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 SCNN1BP51168 640 aa16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 RHOAP61586 193 aa16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 LONRF1Q17RB8 773 aa16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 TTMPQ5BVD1 217 aa16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 UNC5AQ6ZN44 842 aa16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 LRCH3Q96II8 777 aa16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 NSMCE3Q96MG7 304 aa16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 TMEM109Q9BVC6 243 aa16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 THG1LQ9NWX6 298 aaKnown RBP16.93■□□□□ 0.3
PDXDC1-204ENST00000455313 TCRBV9S1A1TA0A576 114 aa16.92■□□□□ 0.3
PDXDC1-204ENST00000455313 GOLGA6L10A6NI86 522 aa16.92■□□□□ 0.3
PDXDC1-204ENST00000455313 AP3B1O00203 1094 aa16.92■□□□□ 0.3
PDXDC1-204ENST00000455313 INSIG1O15503 277 aa16.92■□□□□ 0.3
PDXDC1-204ENST00000455313 TPH1P17752 444 aa16.92■□□□□ 0.3
PDXDC1-204ENST00000455313 SLCO1A2P46721 670 aa16.92■□□□□ 0.3
PDXDC1-204ENST00000455313 STK19P49842 368 aaPredicted RBP16.92■□□□□ 0.3
PDXDC1-204ENST00000455313 STAT4Q14765 748 aa16.92■□□□□ 0.3
PDXDC1-204ENST00000455313 C12orf40Q86WS4 652 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms