RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 PASD1Q8IV76 773 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 ARL14Q8N4G2 192 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 WDTC1Q8N5D0 677 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 TMEM35BQ8NCS4 154 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 ZNF548Q8NEK5 533 aaPredicted RBP8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 OR52K2Q8NGK3 314 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 IFI44Q8TCB0 444 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 SNRNP27Q8WVK2 155 aaKnown RBP8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 KLK6Q92876 244 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 NT5C3BQ969T7 300 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 ISG20Q96AZ6 181 aaKnown RBP8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 ARRDC3Q96B67 414 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 LENG8Q96PV6 779 aaPredicted RBP8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 PSMB7Q99436 277 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 NPY6RQ99463 290 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 IL12RB2Q99665 862 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 HEPHQ9BQS7 1158 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 CRACR2AQ9BSW2 395 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 ZYG11BQ9C0D3 744 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 ATP13A1Q9HD20 1204 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 GPR27Q9NS67 375 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 PIGVQ9NUD9 493 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 SPASTQ9UBP0 616 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 RWDD2AQ9UIY3 292 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 HPCAL4Q9UM19 191 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 PCDHB1Q9Y5F3 818 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 PCDHGA8Q9Y5G5 932 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 RP1P56715 2156 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 TMX2-CTNND1H3BSU7 103 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 J3QKU1 62 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 K7ERQ8 282 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 AQP9O43315 295 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 SMAD6O43541 496 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 CNTN5O94779 1100 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 LSM8O95777 96 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 GIMD1P0DJR0 217 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 JUNDP17535 347 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 BMP6P22004 513 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 DNA2P51530 1060 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 IRAK1P51617 712 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 THOP1P52888 689 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 CLDN2P57739 230 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 RNASE9P60153 205 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 PDE1CQ14123 709 aaPredicted RBP8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 FZD2Q14332 565 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 POLD3Q15054 466 aaPredicted RBP8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 QPCTQ16769 361 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 ARL13BQ3SXY8 428 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 PTPN20Q4JDL3 420 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 ALFQ53S48 1182 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 CARD16Q5EG05 197 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 FAM102AQ5T9C2 384 aaPredicted RBP8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 SEL1L3Q68CR1 1132 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 LINGO4Q6UY18 593 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 ARCQ7LC44 396 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 TFAP2DQ7Z6R9 452 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 C14orf80Q86SX3 495 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 CREBRFQ8IUR6 639 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 FAM114A1Q8IWE2 563 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 ZNF683Q8IZ20 524 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 SLC22A18ASQ8N1D0 253 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 CHST14Q8NCH0 376 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 SCG3Q8WXD2 468 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 C18orf8Q96DM3 657 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 NAF1Q96HR8 494 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 VCPIP1Q96JH7 1222 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 SPON2Q9BUD6 331 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 C1QTNF2Q9BXJ5 285 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 OSBPL1AQ9BXW6 950 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 TNKS2Q9H2K2 1166 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 FZD3Q9NPG1 666 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 ACP6Q9NPH0 428 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 ASCL3Q9NQ33 180 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 PLA2G2EQ9NZK7 142 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 PPARGC1AQ9UBK2 798 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 ZFR2Q9UPR6 939 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 FADS3Q9Y5Q0 445 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 WASF2Q9Y6W5 498 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 SMG1Q96Q15 3661 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 CHD5Q8TDI0 1954 aa8.17□□□□□ -1.1
NIF3L1-209ENST00000454952 A0A0D9SEW6 157 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 CPED1A4D0V7 1026 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 EME2A4GXA9 379 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 ZSCAN5CA6NGD5 496 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 BIN1O00499 593 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 SRGAP2O75044 1071 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 PAK4O96013 591 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 ANXA6P08133 673 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 SLC9A1P19634 815 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 PON1P27169 355 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 CDH5P33151 784 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 GGCXP38435 758 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 MTIF2P46199 727 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 GABRB2P47870 512 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 MAPKAPK2P49137 400 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 BLKP51451 505 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 CCNHP51946 323 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 SNRPD1P62314 119 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 YPEL5P62699 121 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 LSM11P83369 360 aaKnown RBP eCLIP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms