RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 SLC45A3Q96JT2 553 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 RNF208Q9H0X6 261 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 PCDHAC1Q9H158 963 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 AGO3Q9H9G7 860 aaKnown RBP11.31□□□□□ -0.6
DDR1-239ENST00000452441 MIOSQ9NXC5 875 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 FAM95CA0A1B0GW59 222 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 NR5A2O00482 541 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 BAIAP3O94812 1187 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 F2P00734 622 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 PLOD1Q02809 727 aaPredicted RBP11.31□□□□□ -0.6
DDR1-239ENST00000452441 COL9A2Q14055 689 aaPredicted RBP11.31□□□□□ -0.6
DDR1-239ENST00000452441 ARMC3Q5W041 872 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 RAP1GAP2Q684P5 730 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 MIER2Q8N344 545 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 OR6K2Q8NGY2 324 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 MIPOL1Q8TD10 442 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 MS4A4AQ96JQ5 239 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 GRIP2Q9C0E4 1043 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 MUC3BQ9H195 1237 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 PCDHB7Q9Y5E2 793 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 PARP14Q460N5 1801 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 TM7SF2O76062 418 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 COX4I1P13073 169 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 PTPN3P26045 913 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 ALDH7A1P49419 539 aaKnown RBP11.31□□□□□ -0.6
DDR1-239ENST00000452441 ZBTB17Q13105 803 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 PTK2BQ14289 1009 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 GALNT3Q14435 633 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 RSPH1Q8WYR4 309 aa11.31□□□□□ -0.6
DDR1-239ENST00000452441 FCRL2Q96LA5 508 aaPredicted RBP11.31□□□□□ -0.6
DDR1-239ENST00000452441 MRPL1Q9BYD6 325 aaKnown RBP11.31□□□□□ -0.6
DDR1-239ENST00000452441 NUMA1Q14980 2115 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 BCLAF3A2AJT9 711 aaKnown RBP11.3□□□□□ -0.6
DDR1-239ENST00000452441 FAM149AA5PLN7 773 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 SUPT3HB4E1H0 165 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 AGRPO00253 132 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 KATNA1O75449 491 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 IDH3AP50213 366 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 GATMP50440 423 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 AQP4P55087 323 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 HSF5Q4G112 596 aaPredicted RBP11.3□□□□□ -0.6
DDR1-239ENST00000452441 SH2D5Q6ZV89 423 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 TMCO2Q7Z6W1 182 aaPredicted RBP11.3□□□□□ -0.6
DDR1-239ENST00000452441 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.3□□□□□ -0.6
DDR1-239ENST00000452441 GABPB2Q8TAK5 448 aaPredicted RBP11.3□□□□□ -0.6
DDR1-239ENST00000452441 C7orf26Q96N11 449 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 SEPHS2Q99611 448 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 FAM96AQ9H5X1 160 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 LCTP09848 1927 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 TTC3P53804 2025 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 COL1A2P08123 1366 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 DNAJA2O60884 412 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 F9P00740 461 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 LYNP07948 512 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 PAMP19021 973 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 CHRM3P20309 590 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 CCND3P30281 292 aaPredicted RBP11.3□□□□□ -0.6
DDR1-239ENST00000452441 NR2C2P49116 596 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 CDH17Q12864 832 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 ITGA7Q13683 1181 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 TMEM110Q86TL2 294 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 TTC30BQ8N4P2 665 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 SNRNP27Q8WVK2 155 aaKnown RBP11.3□□□□□ -0.6
DDR1-239ENST00000452441 SOCS4Q8WXH5 440 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 SLC4A5Q9BY07 1137 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 CATSPERBQ9H7T0 1116 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 ARHGEF37A1IGU5 675 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 FAM189A1O60320 539 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 MAGEC1O60732 1142 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 TSHRP16473 764 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 CRHR1P34998 444 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 GPR15P49685 360 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 PSMD5Q16401 504 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 PFKFB4Q16877 469 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 CMPK2Q5EBM0 449 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 NAPRTQ6XQN6 538 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 NET1Q7Z628 596 aaPredicted RBP11.3□□□□□ -0.6
DDR1-239ENST00000452441 TAC4Q86UU9 113 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 BBS5Q8N3I7 341 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 CYGBQ8WWM9 190 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 TUBGCP5Q96RT8 1024 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 ECSITQ9BQ95 431 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 ADAMTS10Q9H324 1103 aa11.3□□□□□ -0.6
DDR1-239ENST00000452441 IPO11Q9UI26 975 aaKnown RBP11.3□□□□□ -0.6
DDR1-239ENST00000452441 FBXO21O94952 628 aa11.29□□□□□ -0.6
DDR1-239ENST00000452441 GUCA1CO95843 209 aa11.29□□□□□ -0.6
DDR1-239ENST00000452441 ROR2Q01974 943 aaKnown RBP11.29□□□□□ -0.6
DDR1-239ENST00000452441 DUSP4Q13115 394 aa11.29□□□□□ -0.6
DDR1-239ENST00000452441 CWF19L1Q69YN2 538 aaKnown RBP11.29□□□□□ -0.6
DDR1-239ENST00000452441 BNC2Q6ZN30 1099 aaPredicted RBP11.29□□□□□ -0.6
DDR1-239ENST00000452441 OR9I1Q8NGQ6 314 aa11.29□□□□□ -0.6
DDR1-239ENST00000452441 DNAJC1Q96KC8 554 aaKnown RBP11.29□□□□□ -0.6
DDR1-239ENST00000452441 RPL10LQ96L21 214 aaKnown RBP11.29□□□□□ -0.6
DDR1-239ENST00000452441 APOL5Q9BWW9 433 aa11.29□□□□□ -0.6
DDR1-239ENST00000452441 SEMA4BQ9NPR2 832 aaPredicted RBP11.29□□□□□ -0.6
DDR1-239ENST00000452441 CAPN14A8MX76 684 aa11.29□□□□□ -0.6
DDR1-239ENST00000452441 AURKAO14965 403 aa11.29□□□□□ -0.6
DDR1-239ENST00000452441 GPR32O75388 356 aa11.29□□□□□ -0.6
DDR1-239ENST00000452441 TFEBP19484 476 aa11.29□□□□□ -0.6
DDR1-239ENST00000452441 HADHAP40939 763 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms