RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 TNFAIP3P21580 790 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 AKT2P31751 481 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 NXPH1P58417 271 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 ETF1P62495 437 aaKnown RBP22.05■■□□□ 1.12
C9orf3-208ENST00000451893 OVGP1Q12889 678 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 POLD3Q15054 466 aaPredicted RBP22.05■■□□□ 1.12
C9orf3-208ENST00000451893 EFHC2Q5JST6 749 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 DNTTIP2Q5QJE6 756 aaKnown RBP22.05■■□□□ 1.12
C9orf3-208ENST00000451893 FBXL19Q6PCT2 694 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 DCUN1D2Q6PH85 259 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 ERN2Q76MJ5 926 aaKnown RBP22.05■■□□□ 1.12
C9orf3-208ENST00000451893 CHST14Q8NCH0 376 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 C3orf20Q8ND61 904 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 BAHD1Q8TBE0 780 aaPredicted RBP22.05■■□□□ 1.12
C9orf3-208ENST00000451893 KLK6Q92876 244 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 KLHDC7BQ96G42 594 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 AGPAT1Q99943 283 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 SYT11Q9BT88 431 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 ZDHHC6Q9H6R6 413 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 FCF1Q9Y324 198 aaKnown RBP22.05■■□□□ 1.12
C9orf3-208ENST00000451893 DOCK9Q9BZ29 2069 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 A0A1W2PQU0 124 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 A0A1W2PR77 199 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 WNT9AO14904 365 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 KIF5CO60282 957 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 RAMP2O60895 175 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 LEFTY1O75610 366 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 LDOC1O95751 146 aaPredicted RBP22.04■■□□□ 1.12
C9orf3-208ENST00000451893 RHOQP17081 205 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 NEK3P51956 506 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 CARD16Q5EG05 197 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 NEK5Q6P3R8 708 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 DPY19L3Q6ZPD9 716 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 BNIPLQ7Z465 357 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 SLFN11Q7Z7L1 901 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 IQCHQ86VS3 1027 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 PHF13Q86YI8 300 aaPredicted RBP22.04■■□□□ 1.12
C9orf3-208ENST00000451893 EID2Q8N6I1 236 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 ARRDC3Q96B67 414 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 CNDP2Q96KP4 475 aaKnown RBP22.04■■□□□ 1.12
C9orf3-208ENST00000451893 PCDHB18PQ96TA0 734 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 HEPHQ9BQS7 1158 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 TMEM121BQ9BXQ6 578 aaPredicted RBP22.04■■□□□ 1.12
C9orf3-208ENST00000451893 TM6SF2Q9BZW4 377 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 OSBPL2Q9H1P3 480 aa22.04■■□□□ 1.12
C9orf3-208ENST00000451893 A0A087X0T9 212 aa22.03■■□□□ 1.12
C9orf3-208ENST00000451893 FAM228BP0C875 321 aa22.03■■□□□ 1.12
C9orf3-208ENST00000451893 PRLRP16471 622 aa22.03■■□□□ 1.12
C9orf3-208ENST00000451893 RFC1P35251 1148 aaPredicted RBP22.03■■□□□ 1.12
C9orf3-208ENST00000451893 PIP5KL1Q5T9C9 394 aa22.03■■□□□ 1.12
C9orf3-208ENST00000451893 PPP1R2P3Q6NXS1 205 aa22.03■■□□□ 1.12
C9orf3-208ENST00000451893 ALKBH5Q6P6C2 394 aaKnown RBP22.03■■□□□ 1.12
C9orf3-208ENST00000451893 CCDC185Q8N715 623 aa22.03■■□□□ 1.12
C9orf3-208ENST00000451893 FAM131CQ96AQ9 280 aa22.03■■□□□ 1.12
C9orf3-208ENST00000451893 C16orf45Q96MC5 204 aaPredicted RBP22.03■■□□□ 1.12
C9orf3-208ENST00000451893 MCEEQ96PE7 176 aa22.03■■□□□ 1.12
C9orf3-208ENST00000451893 RETREG1Q9H6L5 497 aa22.03■■□□□ 1.12
C9orf3-208ENST00000451893 PTPRBP23467 1997 aa22.03■■□□□ 1.12
C9orf3-208ENST00000451893 BTNL10A8MVZ5 291 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 NEMP1O14524 444 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 ENC1O14682 589 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 CREB3O43889 395 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 LRIG2O94898 1065 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 GZMAP12544 262 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 EPHA8P29322 1005 aaPredicted RBP22.02■■□□□ 1.12
C9orf3-208ENST00000451893 ACVRL1P37023 503 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 ARHGAP25P42331 645 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 CCNHP51946 323 aaPredicted RBP22.02■■□□□ 1.12
C9orf3-208ENST00000451893 GSCP56915 257 aaPredicted RBP22.02■■□□□ 1.12
C9orf3-208ENST00000451893 ARF5P84085 180 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 NRG1Q02297 640 aaPredicted RBP22.02■■□□□ 1.12
C9orf3-208ENST00000451893 C1QBPQ07021 282 aaKnown RBP22.02■■□□□ 1.12
C9orf3-208ENST00000451893 SCAPQ12770 1279 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 RAB6CQ53S08 254 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 CCDC122Q5T0U0 273 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 HORMAD1Q86X24 394 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 RNF10Q8N5U6 811 aaKnown RBP22.02■■□□□ 1.12
C9orf3-208ENST00000451893 CALN1Q9BXU9 219 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 RAB6CQ9H0N0 254 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 MAGEH1Q9H213 219 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 CCDC86Q9H6F5 360 aaKnown RBP22.02■■□□□ 1.12
C9orf3-208ENST00000451893 ERVMER34-1Q9H9K5 563 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 TMEM248Q9NWD8 314 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 HECAQ9UBI9 543 aaPredicted RBP22.02■■□□□ 1.12
C9orf3-208ENST00000451893 NENFQ9UMX5 172 aa22.02■■□□□ 1.12
C9orf3-208ENST00000451893 FAM221BA6H8Z2 402 aa22.01■■□□□ 1.11
C9orf3-208ENST00000451893 SIGLEC16A6NMB1 481 aa22.01■■□□□ 1.11
C9orf3-208ENST00000451893 DDX3XO00571 662 aaKnown RBP eCLIP22.01■■□□□ 1.113e-11■■■□□ 16.8
C9orf3-208ENST00000451893 THEGLP0DJG4 465 aa22.01■■□□□ 1.11
C9orf3-208ENST00000451893 HNRNPA2B1P22626 353 aaKnown RBP22.01■■□□□ 1.11
C9orf3-208ENST00000451893 EPHB2P29323 1055 aa22.01■■□□□ 1.11
C9orf3-208ENST00000451893 HDAC4P56524 1084 aa22.01■■□□□ 1.11
C9orf3-208ENST00000451893 SNRPD1P62314 119 aaKnown RBP22.01■■□□□ 1.11
C9orf3-208ENST00000451893 KIF18AQ8NI77 898 aa22.01■■□□□ 1.11
C9orf3-208ENST00000451893 ARHGEF2Q92974 986 aaKnown RBP22.01■■□□□ 1.11
C9orf3-208ENST00000451893 NTAN1Q96AB6 310 aa22.01■■□□□ 1.11
C9orf3-208ENST00000451893 CALR3Q96L12 384 aaKnown RBP22.01■■□□□ 1.11
C9orf3-208ENST00000451893 EPAS1Q99814 870 aa22.01■■□□□ 1.11
C9orf3-208ENST00000451893 HDAC8Q9BY41 377 aa22.01■■□□□ 1.11
C9orf3-208ENST00000451893 CATSPERBQ9H7T0 1116 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms