RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CAB39LQ9H9S4 337 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 IGSF5Q9NSI5 407 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 TMEM216Q9P0N5 145 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 MARCH4Q9P2E8 410 aaPredicted RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 INTS6Q9UL03 887 aaKnown RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 PHTF1Q9UMS5 762 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 TCAF1Q9Y4C2 921 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 KCTD3Q9Y597 815 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 INSL5Q9Y5Q6 135 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 CKAP5Q14008 2032 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 GOLGA6L10A6NI86 522 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 PRSS56P0CW18 603 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 SLC1A2P43004 574 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 ABCG1P45844 678 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 ZNF140P52738 457 aaPredicted RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 SMAD1Q15797 465 aaKnown RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 GAB4Q2WGN9 574 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 ARL13BQ3SXY8 428 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 XKR5Q6UX68 686 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP46-202ENST00000451218 GRIN3AQ8TCU5 1115 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 USP33Q8TEY7 942 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 FAM111AQ96PZ2 611 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 TLR8Q9NR97 1041 aaKnown RBP6.68□□□□□ -1.34
USP46-202ENST00000451218 RSPH14Q9UHP6 348 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 CCL26Q9Y258 94 aa6.68□□□□□ -1.34
USP46-202ENST00000451218 A0A0U1RQS6 177 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 C5orf67F2Z3F1 127 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 DFFAO00273 331 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 HOXA2O43364 376 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 PLIN3O60664 434 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 MPP1Q00013 466 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 BTG3Q14201 252 aaPredicted RBP6.67□□□□□ -1.34
USP46-202ENST00000451218 PTPRCAPQ14761 206 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 PKN3Q6P5Z2 889 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 PPP1R21Q6ZMI0 780 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 BZW1Q7L1Q6 419 aaKnown RBP6.67□□□□□ -1.34
USP46-202ENST00000451218 PID1Q7Z2X4 250 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 PACS2Q86VP3 889 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 DCLK2Q8N568 766 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 LZTR1Q8N653 840 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 MRRFQ96E11 262 aaKnown RBP6.67□□□□□ -1.34
USP46-202ENST00000451218 MIPEPQ99797 713 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 TRIM62Q9BVG3 475 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 LRRC40Q9H9A6 602 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 IPO11Q9UI26 975 aaKnown RBP6.67□□□□□ -1.34
USP46-202ENST00000451218 PIKFYVEQ9Y2I7 2098 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 ACSL4O60488 711 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 BPGMP07738 259 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 ALDH3A1P30838 453 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 SCTRP47872 440 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 KCNC1P48547 511 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 MAPKAPK2P49137 400 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 SUOXP51687 545 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 IL10RBQ08334 325 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 NAB1Q13506 487 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 SKIDA1Q1XH10 827 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 MGAT5BQ3V5L5 792 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 TPGS2Q68CL5 300 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 MIB1Q86YT6 1006 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 PPM1NQ8N819 430 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 ELAC2Q9BQ52 826 aaKnown RBP6.67□□□□□ -1.34
USP46-202ENST00000451218 IL22Q9GZX6 179 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 SNX15Q9NRS6 342 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 TRIM33Q9UPN9 1127 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 FRYLO94915 3013 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 CCT8L1PA6NM43 557 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 GOLGA8TH3BQL2 631 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 MOCS2O96007 188 aaPredicted RBP6.67□□□□□ -1.34
USP46-202ENST00000451218 CTSAP10619 480 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 BGNP21810 368 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 IKBKEQ14164 716 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 ZNF460Q14592 562 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 MROH9Q5TGP6 573 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 FAM109BQ6ICB4 259 aaPredicted RBP6.67□□□□□ -1.34
USP46-202ENST00000451218 KIAA0907Q7Z7F0 614 aaPredicted RBP6.67□□□□□ -1.34
USP46-202ENST00000451218 CCNYQ8ND76 341 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 VN1R2Q8NFZ6 395 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 MYO19Q96H55 970 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 UBXN10Q96LJ8 280 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 OLA1Q9NTK5 396 aaKnown RBP6.67□□□□□ -1.34
USP46-202ENST00000451218 SEPT10Q9P0V9 454 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 KDELR3O43731 214 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 BAIAP3O94812 1187 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 GM2AP17900 193 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 PHBP35232 272 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 SERPINB6P35237 376 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 TIE1P35590 1138 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 SERPINB4P48594 390 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 TWF1Q12792 350 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 ELAVL2Q12926 359 aaKnown RBP6.67□□□□□ -1.34
USP46-202ENST00000451218 GRM3Q14832 879 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 C16orf46Q6P387 395 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 CNPY4Q8N129 248 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 OR7D4Q8NG98 312 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 FBXO27Q8NI29 283 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 HMGCLL1Q8TB92 370 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 TLE6Q9H808 572 aa6.67□□□□□ -1.34
USP46-202ENST00000451218 USP15Q9Y4E8 981 aaPredicted RBP6.67□□□□□ -1.34
USP46-202ENST00000451218 VPS13AQ96RL7 3174 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms