RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ZCWPW2A0A1B0GU75 182 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 ZMPSTE24O75844 475 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 CHN1P15882 459 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 CES1P23141 567 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 MZF1P28698 734 aaPredicted RBP14.45□□□□□ -0.1
USP39-207ENST00000450066 MGAT5Q09328 741 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 SLC14A2Q15849 920 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 DUSP6Q16828 381 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 LGSNQ5TDP6 509 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 PPP2R2DQ66LE6 453 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 CES3Q6UWW8 571 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 MARK2Q7KZI7 788 aaKnown RBP14.45□□□□□ -0.1
USP39-207ENST00000450066 UNC5BQ8IZJ1 945 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 ZNF669Q96BR6 464 aaPredicted RBP14.45□□□□□ -0.1
USP39-207ENST00000450066 ALG14Q96F25 216 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 CERS2Q96G23 380 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 SMC6Q96SB8 1091 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 NKX2-4Q9H2Z4 354 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 KCNK9Q9NPC2 374 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 VPS28Q9UK41 221 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 LOC285095A0A1B0GVY8 99 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 A0A1W2PPM1 405 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 TTC24A2A3L6 582 aaPredicted RBP14.44□□□□□ -0.1
USP39-207ENST00000450066 CCDC85CA6NKD9 419 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 KRT37O76014 449 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 CYBBP04839 570 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 SERPINF2P08697 491 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 LSP1P33241 339 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 SLC18A1P54219 525 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 ARF5P84085 180 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 INO80DQ53TQ3 878 aaPredicted RBP14.44□□□□□ -0.1
USP39-207ENST00000450066 PKN3Q6P5Z2 889 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 KDELC2Q7Z4H8 507 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 CNPY4Q8N129 248 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 WFDC5Q8TCV5 224 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 BHMTQ93088 406 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 MFSD3Q96ES6 412 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 GDF15Q99988 308 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 MRM3Q9HC36 420 aaKnown RBP14.44□□□□□ -0.1
USP39-207ENST00000450066 SSU72Q9NP77 194 aaKnown RBP14.44□□□□□ -0.1
USP39-207ENST00000450066 ACTL7AQ9Y615 435 aa14.44□□□□□ -0.1
USP39-207ENST00000450066 PRPF4O43172 522 aaKnown RBP eCLIP14.43□□□□□ -0.1
USP39-207ENST00000450066 FAM155BO75949 473 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 KRT38O76015 456 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 EPOP01588 193 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 TCF3P15923 654 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 CSKP41240 450 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 NRIP1P48552 1158 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 SERPINB9P50453 376 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 PPARDQ03181 441 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 POU6F1Q14863 301 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 CYTH1Q15438 398 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 SLC1A5Q15758 541 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 FYB2Q5VWT5 728 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 TPGS1Q6ZTW0 290 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 DCAF4L2Q8NA75 395 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 PPHLN1Q8NEY8 458 aaKnown RBP14.43□□□□□ -0.1
USP39-207ENST00000450066 FIBINQ8TAL6 211 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 RIN3Q8TB24 985 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 SMG7Q92540 1137 aaKnown RBP14.43□□□□□ -0.1
USP39-207ENST00000450066 FEM1CQ96JP0 617 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 KIF9Q9HAQ2 790 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 SLC28A3Q9HAS3 691 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 PIDD1Q9HB75 910 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 INTS9Q9NV88 658 aaKnown RBP14.43□□□□□ -0.1
USP39-207ENST00000450066 ZFATQ9P243 1243 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 SMG5Q9UPR3 1016 aaKnown RBP14.43□□□□□ -0.1
USP39-207ENST00000450066 MRPS23Q9Y3D9 190 aaKnown RBP14.43□□□□□ -0.1
USP39-207ENST00000450066 BPTFQ12830 3046 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 SRRM3A6NNA2 597 aaPredicted RBP14.43□□□□□ -0.1
USP39-207ENST00000450066 SNAP91O60641 907 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 UGT1A9O60656 530 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 PRAMEF12O95522 483 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 CD160O95971 181 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 MT-ND3P03897 115 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 SNRPAP09012 282 aaKnown RBP14.43□□□□□ -0.1
USP39-207ENST00000450066 KRT4P19013 534 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 CR2P20023 1033 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 ADRA1DP25100 572 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 CNTFP26441 200 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 CHRNA4P43681 627 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 SERPINH1P50454 418 aaKnown RBP14.43□□□□□ -0.1
USP39-207ENST00000450066 MPP2Q14168 576 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 GDPD5Q8WTR4 605 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 MTBPQ96DY7 904 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 ZSWIM3Q96MP5 696 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 C2orf49Q9BVC5 232 aaPredicted RBP14.43□□□□□ -0.1
USP39-207ENST00000450066 UGT1A7Q9HAW7 530 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 UGT1A10Q9HAW8 530 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 UGT1A8Q9HAW9 530 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 KIAA1522Q9P206 1035 aaPredicted RBP14.43□□□□□ -0.1
USP39-207ENST00000450066 PRKAG3Q9UGI9 489 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 VPS51Q9UID3 782 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 TCAF1Q9Y4C2 921 aa14.43□□□□□ -0.1
USP39-207ENST00000450066 FAM47DPA6NHR8 397 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 GJB3O75712 270 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 ERVK-10P10266 1014 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 CEBPBP17676 345 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 NMBRP28336 390 aa14.42□□□□□ -0.1
USP39-207ENST00000450066 GBP2P32456 591 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms