RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 SLC6A4P31645 630 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 CTHP32929 405 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 ADRA1AP35348 466 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 HADHAP40939 763 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 NEK3P51956 506 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 GNA12Q03113 381 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 LBRQ14739 615 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 SLC1A5Q15758 541 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 SLC14A2Q15849 920 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 UGP2Q16851 508 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 CERCAMQ5T4B2 595 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 STXBP5Q5T5C0 1151 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 PKN3Q6P5Z2 889 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 FOXR1Q6PIV2 292 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 RANBP10Q6VN20 620 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 SH2D5Q6ZV89 423 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 TMC7Q7Z402 723 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 AUTS2Q8WXX7 1259 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 RAD9AQ99638 391 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 APOL2Q9BQE5 337 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 TRIM56Q9BRZ2 755 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 STOML2Q9UJZ1 356 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 LSM7Q9UK45 103 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 ZNF510Q9Y2H8 683 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 IRAK3Q9Y616 596 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 ZFP37Q9Y6Q3 630 aaPredicted RBP10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 HEATR9A2RTY3 570 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 C2orf78A6NCI8 922 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 GOLGA8RI6L899 631 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 TGM5O43548 720 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 TIMM44O43615 452 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 KDELR3O43731 214 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 PMPCBO75439 489 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 RFPL1O75677 317 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 FGF19O95750 216 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 OLFM2O95897 454 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 C1RP00736 705 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 RHOCP08134 193 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 TAC1P20366 129 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 CES1P23141 567 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 CDC25CP30307 473 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 OXCT1P55809 520 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 WNT3AP56704 352 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 PDE1BQ01064 536 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 SLC10A7Q0GE19 358 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 ILF2Q12905 390 aaKnown RBP10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 OLIG2Q13516 323 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 DBN1Q16643 649 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 SWI5Q1ZZU3 235 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 MROH9Q5TGP6 573 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 IL31Q6EBC2 164 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 RFWD3Q6PCD5 774 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 KDELC1Q6UW63 502 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 KCNMB4Q86W47 210 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 CIR1Q86X95 450 aaPredicted RBP10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 KLHL23Q8NBE8 558 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 BADQ92934 168 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 MRGPRX2Q96LB1 330 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 RANBP9Q96S59 729 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 SRPK1Q96SB4 655 aaKnown RBP10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 KLF6Q99612 283 aaPredicted RBP10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 ELAC2Q9BQ52 826 aaKnown RBP10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 PITPNM3Q9BZ71 974 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 RNF38Q9H0F5 515 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 CHRAC1Q9NRG0 131 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 C20orf96Q9NUD7 363 aaPredicted RBP10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 FGFR1OP2Q9NVK5 253 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 PRKAG3Q9UGI9 489 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 SEPT3Q9UH03 358 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 AGO1Q9UL18 857 aaKnown RBP10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 TCAF1Q9Y4C2 921 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 SLC4A7Q9Y6M7 1214 aa10.71□□□□□ -0.69
VIPAS39-203ENST00000448935 DENND4CQ5VZ89 1909 aa10.71□□□□□ -0.7
VIPAS39-203ENST00000448935 BRCA2P51587 3418 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 SNX3O60493 162 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 GLRA3O75311 464 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 KLKB1P03952 638 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 ITGA2BP08514 1039 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 DHRS4L1P0CG22 281 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 ERVK-10P10266 1014 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 NEFHP12036 1026 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 TPH1P17752 444 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 HDCP19113 662 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 CRHR1P34998 444 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 ACVRL1P37023 503 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 SERPINB4P48594 390 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 SMAD3P84022 425 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 UBE3AQ05086 875 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 BMPR2Q13873 1038 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 INSCQ1MX18 579 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 DENND5AQ6IQ26 1287 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 LILRA6Q6PI73 481 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 C16orf59Q7L2K0 433 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 NLRP9Q7RTR0 991 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 UBE2Q1Q7Z7E8 422 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 NDUFAF2Q8N183 169 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 CFAP52Q8N1V2 620 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 HJURPQ8NCD3 748 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 ARMC2Q8NEN0 867 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms