RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 MCF2LO15068 1137 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 CLDN11O75508 207 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 RFPL3O75679 317 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 MTA2O94776 668 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 PSMA2P25787 234 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 NAP1L1P55209 391 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 NXPH1P58417 271 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 ILKQ13418 452 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 AUHQ13825 339 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 MESDQ14696 234 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 STAT4Q14765 748 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 DLG2Q15700 870 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 C6orf118Q5T5N4 469 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 CXorf57Q6NSI4 855 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 MARCH9Q86YJ5 346 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 EID2Q8N6I1 236 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 ARFGAP1Q8N6T3 406 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 KIAA1524Q8TCG1 905 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 TSC1Q92574 1164 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 ALG14Q96F25 216 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 RPRD1AQ96P16 312 aaPredicted RBP14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 RRN3Q9NYV6 651 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 UVRAGQ9P2Y5 699 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 PPM1HQ9ULR3 514 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 ZKSCAN5Q9Y2L8 839 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 A0A0A6YYK5 440 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 GRID2IPA4D2P6 1211 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 BTNL10A8MVZ5 291 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 PRAMEF26H0Y7S4 382 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 M0QYT0 321 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 PLRG1O43660 514 aaKnown RBP14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 BUB1BO60566 1050 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 RNGTTO60942 597 aaKnown RBP14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 VAV1P15498 845 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 TCF4P15884 667 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 EPHA8P29322 1005 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 SDC4P31431 198 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 NOS2P35228 1153 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 ZNF143P52747 638 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 CDH4P55283 916 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 NME3Q13232 169 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 TCEAL1Q15170 157 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 C5orf22Q49AR2 442 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 SETMARQ53H47 684 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 HS1BP3Q53T59 392 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 ACBD5Q5T8D3 534 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 NEK5Q6P3R8 708 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 TRIM69Q86WT6 500 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 RHOT2Q8IXI1 618 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 CACTIN-AS1Q8N1I8 211 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 TPCN2Q8NHX9 752 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 TMPRSS4Q9NRS4 437 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 VANGL2Q9ULK5 521 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 TBC1D30Q9Y2I9 924 aa14.04□□□□□ -0.16
PDLIM2-213ENST00000448520 CELSR3Q9NYQ7 3312 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 NBEAQ8NFP9 2946 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 CKMT2P17540 419 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 ACADVLP49748 655 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 HDAC4P56524 1084 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 TAS2R40P59535 323 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 PPP2CBP62714 309 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 PPP2CAP67775 309 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 BNIP3Q12983 259 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 SOWAHCQ53LP3 525 aaPredicted RBP14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 ZNF662Q6ZS27 426 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 ARCQ7LC44 396 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 CIR1Q86X95 450 aaPredicted RBP14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 SH2D3CQ8N5H7 860 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 PIP4K2CQ8TBX8 421 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 FAM172AQ8WUF8 416 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 NXPE2Q96DL1 559 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 LRIG1Q96JA1 1093 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 CCDC114Q96M63 670 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 CNPY3Q9BT09 278 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 TSGA10Q9BZW7 698 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 NRSN2Q9GZP1 204 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 WDCPQ9H6R7 721 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 PREBQ9HCU5 417 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 ANLNQ9NQW6 1124 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 PIGVQ9NUD9 493 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 IP6K2Q9UHH9 426 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 VPS28Q9UK41 221 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 SARDHQ9UL12 918 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 STAP1Q9ULZ2 295 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 OR51B4Q9Y5P0 310 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 HS3ST4Q9Y661 456 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 SHROOM3Q8TF72 1996 aa14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 TDRD6O60522 2096 aaKnown RBP14.03□□□□□ -0.16
PDLIM2-213ENST00000448520 MYLKQ15746 1914 aa14.02□□□□□ -0.16
PDLIM2-213ENST00000448520 MYO1FO00160 1098 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 PLK4O00444 970 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 ZSCAN12O43309 604 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 KRT86O43790 486 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 PAGE1O75459 146 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 PALMO75781 387 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 PROSCO94903 275 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 F9P00740 461 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 PTPN9P43378 593 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 HADHBP55084 474 aaKnown RBP14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 E2F1Q01094 437 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms