RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 TAS2R39P59534 338 aa15□□□□□ -0.01
SF1-211ENST00000448404 IRF5Q13568 498 aa15□□□□□ -0.01
SF1-211ENST00000448404 PRPSAP1Q14558 356 aa15□□□□□ -0.01
SF1-211ENST00000448404 MS4A13Q5J8X5 152 aa15□□□□□ -0.01
SF1-211ENST00000448404 RTP2Q5QGT7 225 aa15□□□□□ -0.01
SF1-211ENST00000448404 RABGAP1LQ5R372 815 aa15□□□□□ -0.01
SF1-211ENST00000448404 FBXL22Q6P050 247 aa15□□□□□ -0.01
SF1-211ENST00000448404 PKN3Q6P5Z2 889 aa15□□□□□ -0.01
SF1-211ENST00000448404 RNF19BQ6ZMZ0 732 aa15□□□□□ -0.01
SF1-211ENST00000448404 FSTL5Q8N475 847 aaPredicted RBP15□□□□□ -0.01
SF1-211ENST00000448404 OR52K2Q8NGK3 314 aa15□□□□□ -0.01
SF1-211ENST00000448404 IRGQQ8WZA9 623 aa15□□□□□ -0.01
SF1-211ENST00000448404 SCLYQ96I15 445 aa15□□□□□ -0.01
SF1-211ENST00000448404 ELMO2Q96JJ3 720 aa15□□□□□ -0.01
SF1-211ENST00000448404 TLE6Q9H808 572 aa15□□□□□ -0.01
SF1-211ENST00000448404 XPR1Q9UBH6 696 aa15□□□□□ -0.01
SF1-211ENST00000448404 CHD7Q9P2D1 2997 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 KCNU1A8MYU2 1149 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 MUSKO15146 869 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 MATN3O15232 486 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 HNRNPLP14866 589 aaKnown RBP eCLIP14.99□□□□□ -0.01
SF1-211ENST00000448404 KCNA5P22460 613 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 AIF1P55008 147 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 MLLT6P55198 1093 aaPredicted RBP14.99□□□□□ -0.01
SF1-211ENST00000448404 TBX4P57082 545 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 SLC24A5Q71RS6 500 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 TRIM42Q8IWZ5 723 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 PGBD5Q8N414 524 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 BCL7CQ8WUZ0 217 aaPredicted RBP14.99□□□□□ -0.01
SF1-211ENST00000448404 BHMTQ93088 406 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 GLT1D1Q96MS3 346 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 FAM193BQ96PV7 902 aaPredicted RBP14.99□□□□□ -0.01
SF1-211ENST00000448404 SH3GL3Q99963 347 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 SLC7A8Q9UHI5 535 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 PLA2G4CQ9UP65 541 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 A0A0D9SEW6 157 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 SLC12A8A0AV02 714 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 VNN2O95498 520 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 GRIA4P48058 902 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 ARCN1P48444 511 aaKnown RBP14.99□□□□□ -0.01
SF1-211ENST00000448404 HTRA3P83110 453 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 TAF11Q15544 211 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 PDCD2Q16342 344 aaPredicted RBP14.99□□□□□ -0.01
SF1-211ENST00000448404 LRRC36Q1X8D7 754 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 FAM43BQ6ZT52 329 aaPredicted RBP14.99□□□□□ -0.01
SF1-211ENST00000448404 PIM3Q86V86 326 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 CCNJLQ8IV13 435 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 NUP93Q8N1F7 819 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 RTL3Q8N8U3 475 aaKnown RBP14.99□□□□□ -0.01
SF1-211ENST00000448404 FBXO32Q969P5 355 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 PANX3Q96QZ0 392 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 IL12RB2Q99665 862 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 TNFRSF12AQ9NP84 129 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 APOBEC2Q9Y235 224 aaKnown RBP14.99□□□□□ -0.01
SF1-211ENST00000448404 NLRC5Q86WI3 1866 aa14.99□□□□□ -0.01
SF1-211ENST00000448404 FAM95CA0A1B0GW59 222 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 NBNO60934 754 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 PEX11BO96011 259 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 GLDCP23378 1020 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 CCNCP24863 283 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 SP3Q02447 781 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 DSC1Q08554 894 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 GPNMBQ14956 572 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 ARL13AQ5H913 290 aaPredicted RBP14.98□□□□□ -0.01
SF1-211ENST00000448404 PDPK2PQ6A1A2 396 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 CLEC14AQ86T13 490 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 RNF148Q8N7C7 305 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 TDRD5Q8NAT2 981 aaKnown RBP14.98□□□□□ -0.01
SF1-211ENST00000448404 ACMSDQ8TDX5 336 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 RPRD1AQ96P16 312 aaPredicted RBP14.98□□□□□ -0.01
SF1-211ENST00000448404 OLFM1Q99784 485 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 KIFC1Q9BW19 673 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 C1QTNF1Q9BXJ1 281 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 MARCH4Q9P2E8 410 aaPredicted RBP14.98□□□□□ -0.01
SF1-211ENST00000448404 TAGLN3Q9UI15 199 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 ZDHHC2Q9UIJ5 367 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 TLK1Q9UKI8 766 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 PCDHB8Q9UN66 801 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 CRYL1Q9Y2S2 319 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 SPECC1L-ADORA2AF8WAN1 911 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 PIGNO95427 931 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 ABL2P42684 1182 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 TM4SF4P48230 202 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 NPY2RP49146 381 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 CSHL1Q14406 222 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 GALNT3Q14435 633 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 TCHHL1Q5QJ38 904 aaPredicted RBP14.98□□□□□ -0.01
SF1-211ENST00000448404 RIPOR1Q6ZS17 1223 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 FRMD7Q6ZUT3 714 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 ULK2Q8IYT8 1036 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 EXT2Q93063 718 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 TTC1Q99614 292 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 ZCWPW1Q9H0M4 648 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 RGS18Q9NS28 235 aa14.98□□□□□ -0.01
SF1-211ENST00000448404 XIRP2A4UGR9 3374 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 SMNDC1O75940 238 aaKnown RBP eCLIP14.97□□□□□ -0.011e-7■□□□□ 8.9
SF1-211ENST00000448404 SERPINA6P08185 405 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 MAGEA12P43365 314 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 ATN1P54259 1190 aaPredicted RBP14.97□□□□□ -0.01
SF1-211ENST00000448404 KRT72Q14CN4 511 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms