RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 CCNYQ8ND76 341 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 ZSCAN18Q8TBC5 510 aaPredicted RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 SH3RF2Q8TEC5 729 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 LZICQ8WZA0 190 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 PIWIL1Q96J94 861 aaKnown RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 CEP295NLQ96MC4 621 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 PRPF18Q99633 342 aaKnown RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 PCDH18Q9HCL0 1135 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 ZNF334Q9HCZ1 680 aaPredicted RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 DDX56Q9NY93 547 aaKnown RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 ZMYM5Q9UJ78 669 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 AP4E1Q9UPM8 1137 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 A0A0A6YYK5 440 aaPredicted RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 C2orf78A6NCI8 922 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 TRDMT1O14717 391 aaKnown RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 FSCN2O14926 492 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 DDX6P26196 483 aaKnown RBP eCLIP6.04□□□□□ -1.44
PROM1-201ENST00000447510 TRMT10CQ7L0Y3 403 aaKnown RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 ARID3BQ8IVW6 561 aaPredicted RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 WDR75Q8IWA0 830 aaKnown RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 LGI2Q8N0V4 545 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 POU5F2Q8N7G0 328 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 TDRD5Q8NAT2 981 aaKnown RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 ICA1LQ8NDH6 482 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 CSGALNACT1Q8TDX6 532 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 OVCA2Q8WZ82 227 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 TMA16Q96EY4 203 aaKnown RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 DRC3Q9H069 523 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 ARMC7Q9H6L4 198 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 UBE2ZQ9H832 354 aaPredicted RBP6.04□□□□□ -1.44
PROM1-201ENST00000447510 BRD9Q9H8M2 597 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 TMEM30AQ9NV96 361 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.04□□□□□ -1.44
PROM1-201ENST00000447510 VANGL2Q9ULK5 521 aa6.04□□□□□ -1.44
PROM1-201ENST00000447510 H0Y626 953 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 FOXD2O60548 495 aaPredicted RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 TTC4O95801 387 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 IFNB1P01574 187 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 CORO1AP31146 461 aaKnown RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 HOXA9P31269 272 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 COILP38432 576 aaPredicted RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 NUMBP49757 651 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 ALDH18A1P54886 795 aaKnown RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 PDK3Q15120 406 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 PKDCCQ504Y2 493 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 DCAF12L1Q5VU92 463 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 RAP1GAP2Q684P5 730 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 GALNT4Q8N4A0 578 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 CARNMT1Q8N4J0 409 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 OR6Y1Q8NGX8 325 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 DGCR14Q96DF8 476 aaKnown RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 TDP1Q9NUW8 608 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 TAS2R1Q9NYW7 299 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 PACSIN3Q9UKS6 424 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 PPM1HQ9ULR3 514 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 TMEM247A6NEH6 219 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 C2CD4BA6NLJ0 364 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 H7C0C1 242 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 ZBTB24O43167 697 aaPredicted RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 COCHO43405 550 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 BNIP3LO60238 219 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 CEBPBP17676 345 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 NELFEP18615 380 aaKnown RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 ADRA1DP25100 572 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 GABRB2P47870 512 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 ATP5OP48047 213 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 AQP4P55087 323 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 OXCT1P55809 520 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 DLG1Q12959 904 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 ZNF177Q13360 481 aaPredicted RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 ADAM15Q13444 863 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 CDH18Q13634 790 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 TFDP2Q14188 446 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 ADGRE1Q14246 886 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 TRIP4Q15650 581 aaPredicted RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 RNF219Q5W0B1 726 aaPredicted RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 PAOXQ6QHF9 649 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 NUDT18Q6ZVK8 323 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 GPR149Q86SP6 731 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 MAFAQ8NHW3 353 aaPredicted RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 ITFG1Q8TB96 612 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 PABPC5Q96DU9 382 aaKnown RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 PKMYT1Q99640 499 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 IL1RAPL1Q9NZN1 696 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 SEPT10Q9P0V9 454 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 STARD13Q9Y3M8 1113 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 HBS1LQ9Y450 684 aaKnown RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 GMEB1Q9Y692 573 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 ARHGAP10A1A4S6 786 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 NDC80O14777 642 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 SCNN1AP37088 669 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 KCNQ1P51787 676 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 ATXN1P54253 815 aaKnown RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 SLC1A5Q15758 541 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 CCDC14Q49A88 953 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 STXBP5Q5T5C0 1151 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 PM20D1Q6GTS8 502 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 KLHL35Q6PF15 583 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 KLHDC10Q6PID8 442 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms